Pairwise Alignments

Query, 441 a.a., transport protein from Sinorhizobium meliloti 1021

Subject, 439 a.a., putrescine-ornithine antiporter (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  201 bits (510), Expect = 5e-56
 Identities = 116/423 (27%), Positives = 202/423 (47%), Gaps = 4/423 (0%)

Query: 6   SGKSLGLAACTAIVVGNMVGSGFYLSPAAVAPYGNLAIVIWIVMGAGAICLGLTFARLAK 65
           S   +G+   T I + NM+GSG  + P  +A  G ++++ W+V  AG+  L   FA+   
Sbjct: 4   SENKIGVVQLTIITIVNMMGSGIIMLPTQLAQVGTISVLSWLVTAAGSTALAFAFAKCGM 63

Query: 66  LSPAVGGPYAYTRLAYGDFPGFLIAWGYWISIWASLPVIAVAFAGVVIDFFPFLRGRGTA 125
            S   GG   Y   A+G    F+  + Y +S+  +   IA++  G               
Sbjct: 64  FSKKSGGMGGYAEYAFGRSGNFMANYTYAVSLLIANVAIAISAVGYAAVLLEVNLSPMAI 123

Query: 126 TLLTLSVIWLVVLVNLRGVHAAGLFSEITTYAKMIPFGAVALLGLFYIDFSHFAD-FNPS 184
            L T+ V+WL  + N  G    G  S +T +  ++P   V+L+G F+ D   +   +NP 
Sbjct: 124 CLATIGVLWLATVANFGGARITGRVSSVTVWGIILPVIGVSLIGWFWFDIDLYKGAWNPH 183

Query: 185 GQPLLQASAALAPLTMFAYLGLESATVPAGDVRDAERTIPRSTVLGIAIAVTLYVLGTIV 244
             P  +A      +T++A+LGLESA   +  V + E+ +P + + G   A  +Y++ T V
Sbjct: 184 DMPFFKALGGSIAMTLWAFLGLESACANSEAVDNPEKNVPIAVMGGTLGAALIYIVSTNV 243

Query: 245 VMGLVPREELVHSVAPFSEAARRMWGPAGELAISLAVVLSSIGALNGWTLLMGQVPMAAA 304
           + G+VP  EL  S APF  A  +M+ P     +    ++S  G+L GW   + QV  A+A
Sbjct: 244 IAGIVPNAELASSNAPFGLAFAQMFNPVVGKIVMACAIISCTGSLLGWQFTIAQVFKASA 303

Query: 305 RDGLFPPLFSRLSARHVPATGIVVSATLATILVLVQAAGSEGFSSIYRLFVGLSTMTAVI 364
            +G FP +F+++S    P  G+ +  ++ T+L L+    S   S  +   V L+ +T ++
Sbjct: 304 DEGFFPKVFAKVSKADAPIWGMTIIVSIQTLLSLMTI--SPSLSKQFEALVNLAVVTNIV 361

Query: 365 PYAFCALASSLVSARVSGGTLIPRV-TLIELVGFTFAIFTLYGCGAEPVLYGLVLLLLSI 423
           PY     A  ++  ++       RV  +I ++G  ++ + LY  G   V+ G +      
Sbjct: 362 PYILSMAALGVMQKQLKVPANKARVANVIAVIGALYSFYALYSSGETAVMLGAIATFFGW 421

Query: 424 PVY 426
            +Y
Sbjct: 422 TIY 424