Pairwise Alignments

Query, 409 a.a., hemolysin D from Sinorhizobium meliloti 1021

Subject, 376 a.a., HlyD family secretion protein from Vibrio cholerae E7946 ATCC 55056

 Score = 84.3 bits (207), Expect = 5e-21
 Identities = 86/325 (26%), Positives = 136/325 (41%), Gaps = 17/325 (5%)

Query: 48  LILTISLITMIFYFHPSTSNVTAVFRTVTIMPESTGRVAEVYVDLNEKVSAGAPLFRLDD 107
           +IL  +LI ++ Y HP T   + V+ T  I+    GRV EV V  N+ ++ G  LFR+D 
Sbjct: 37  VILIGTLILLMNYNHPFTQLGSQVYSTTPIVSGVRGRVVEVPVKPNQPLTQGDVLFRIDP 96

Query: 108 SEQRAALETARRRVAEIEAEAIVAQSELASADGLIAQAEGDYLQALNELETQVELNQRNP 167
               A +   + +V E    A+  +S L  A   + +A  +  +A  E +      QR  
Sbjct: 97  IPFEADVARLKAKVKEASQGALGLESTLKEAQAAVLKAIAERDKAQREYDRYQRGYQRGA 156

Query: 168 NIVARREIER---------LQVAVDGRDGARAASISNKRTLETKIASLLPAQKASAEAAL 218
               + +  R         L+VA   ++ A+ A  S      T +A LL        A L
Sbjct: 157 FTEQQMDTTRQTYKAAQAALEVAQSKQEQAQIALDSEVGGENTTVAQLL--------AEL 208

Query: 219 TQAQVELDKTIVRAGTAGVVQQFALRAGDIVNPMIRSAGILVPEQRRIGLIAGFGQIEAQ 278
            +A+ +L++TIVRA T G V Q ALR G +  P+  +  +           A F Q   Q
Sbjct: 209 RKAEFDLEQTIVRAPTDGYVTQLALRPGMMSVPLPLAPVMTFVHTEEKIYTAAFRQNSLQ 268

Query: 279 VMKAGMIAEATCIGKPFTIIPMVVTEVQDVIAAGQIRPTDQLVDAQQLASPGTLTAYLEP 338
            ++ G  AE      P  +    V EV   I   QI+    L+    L + G +   L  
Sbjct: 269 RLQPGFAAEFMFRALPGKVFKGEVIEVLPAIGESQIQARGALLGTDALRTSGRVFVTLRI 328

Query: 339 LYEGQFSGVPPGSSCIANAYTSNHD 363
             +     +P GS+     Y+ + +
Sbjct: 329 TDDLSQYHLPMGSAVEVAVYSDSFE 353