Pairwise Alignments

Query, 523 a.a., hypothetical protein from Sinorhizobium meliloti 1021

Subject, 569 a.a., mechanosensitive ion channel protein MscS from Vibrio cholerae E7946 ATCC 55056

 Score = 58.9 bits (141), Expect = 5e-13
 Identities = 56/267 (20%), Positives = 116/267 (43%), Gaps = 19/267 (7%)

Query: 234 NGIIALLVADLLWQMSKALIAYRMGLGPKDGSNVDEL-------ARSGRLRTLLP-IFRN 285
           N ++  L ++ +  + +  I   + L  K G+ V          +++ R+  L+   F +
Sbjct: 288 NSLVNWLASNAVQHLFQLFIFLLILLAAKGGAKVTRTVVRSAVNSKNIRISHLMQDFFVS 347

Query: 286 VLAVFIGAVTVLTILSGLGVQIAPLIAGAGIFGVAIGFGSQTLVKDVLSGVFYMLDDAFR 345
           +    +  + +L  LS +G+ +AP++ G GI GV IGF  Q  + +  +G+  ++   F 
Sbjct: 348 MSGKVVWVIGILVGLSQIGLNLAPVLTGFGIAGVIIGFALQDTLSNFAAGMMLLIYRPFD 407

Query: 346 VGEYIQSGSYKGTVESFSLRSVRLRHHRGPIFTVPFGEL--GAVQNMSRDWV--IDKMTL 401
           VG+++ +G   G V   SL +  +R     I  VP  ++    ++N++ + +  +D M  
Sbjct: 408 VGDFVHAGGVDGKVSHMSLVNTTIRTFDNQIIIVPNSKIWGDVIKNVTHERIRRVD-MVF 466

Query: 402 NVTYDADVDLARKLIKKVGQELAADPEFAADTIEPLKMQGVDSFGDFAIVLRMKLMTKPG 461
            + Y  D+  A  ++  + +   A  +     I+      V +    +I   ++   K  
Sbjct: 467 GIGYSDDLLKAEAVLTDIVKSHPAVLKTPEPNIK------VHTLNTSSIDFIVRPWVKTD 520

Query: 462 AQFTIKRRAFMMIKKAFDENGIKIAVP 488
             + +       +K  FD  GI I  P
Sbjct: 521 DYWDVYWDVTKEVKLRFDREGISIPFP 547