Pairwise Alignments

Query, 523 a.a., hypothetical protein from Sinorhizobium meliloti 1021

Subject, 773 a.a., MscS Mechanosensitive ion channel (NCBI) from Rhodospirillum rubrum S1H

 Score =  202 bits (515), Expect = 3e-56
 Identities = 148/494 (29%), Positives = 240/494 (48%), Gaps = 67/494 (13%)

Query: 58  ESDAARRFWLSRISIIAGFLLFGWAIASLMPALSFSNEVTRLAAFLFGLGILVTAVEVVW 117
           ES A    W+ R++ +A   +F   +   +  L        L A LFGL +L  AV ++ 
Sbjct: 261 ESGAYLYIWIRRMTNLAALGVF---VVGTLEVLGLPVGTRELTAKLFGLVMLGLAVVLIL 317

Query: 118 RRPDKPAPLVVKSLL-----------------------TIYLVVLWSAW----------- 143
           +     A  +   +L                        +Y+  L+  W           
Sbjct: 318 QSRKTVASTIRLRILGLGKGSRTAKALGRLAEVWHVLALVYVCALFLTWFLDIPGGFRFA 377

Query: 144 ----VAGLLGLLWLGIYSLLLPPLVRGVGDVAQALATRAQRTGPPGIVLSVVIVRGARAA 199
               V  LL +   G+   L   L+  +  +++ L  R      PG+ L           
Sbjct: 378 TLATVETLLAIAGAGLAMRLSANLLERLFAISEDLQKRH-----PGLTLRANRYLSGLKT 432

Query: 200 VIAAAVAWLAYI-----WRIRAAALAGSEPGAIVIPGLLNGIIALLVADLLWQMSKALIA 254
           V+   +  +A +     W   + A   + PGA +I G ++ I  +L+A         L+A
Sbjct: 433 VVKGIITLVALVLVLQAWGANSIAWV-TGPGARLI-GAVSSIGFILLA--------GLVA 482

Query: 255 YRMGLGPKDG--SNVDE----LARSGRLRTLLPIFRNVLAVFIGAVTVLTILSGLGVQIA 308
           + + +   +   SN+D     + RS R+RTL+P+ R V+ +F+  V  L +LS LG+ I 
Sbjct: 483 WEVVINATERYLSNIDAHGQTIQRSQRVRTLIPLARTVIMIFLVVVVTLIVLSELGMNIG 542

Query: 309 PLIAGAGIFGVAIGFGSQTLVKDVLSGVFYMLDDAFRVGEYIQSGSYKGTVESFSLRSVR 368
           PL+AGAG+ G+AI FG+Q LV+DV++G F ++DDA  VG+ +Q   + G VE  S+RS+R
Sbjct: 543 PLLAGAGVLGLAISFGAQKLVQDVITGAFCLIDDAISVGDVVQVAGHSGVVERLSIRSLR 602

Query: 369 LRHHRGPIFTVPFGELGAVQNMSRDWVIDKMTLNVTYDADVDLARKLIKKVGQELAADPE 428
           LR   G + T+PF  +  V N+++D+    MT+ V Y  D D    L+ KV + L A PE
Sbjct: 603 LRDESGSVHTIPFSSVDTVTNLTKDFSFYVMTIGVAYREDTDAVCALLTKVDEALRAKPE 662

Query: 429 FAADTIEPLKMQGVDSFGDFAIVLRMKLMTKPGAQFTIKRRAFMMIKKAFDENGIKIAVP 488
           +AA+ + PL++ GVDSFG  ++ ++ ++ T+P  Q+ + R    M+K+AFD  GI+I  P
Sbjct: 663 YAAEILAPLEILGVDSFGASSVNIKARIKTRPIKQWFVGREFNRMMKQAFDAAGIEIPFP 722

Query: 489 TVHVSGGSDNAAAA 502
              V  G+D   AA
Sbjct: 723 HTTVYFGTDRQGAA 736