Pairwise Alignments

Query, 523 a.a., hypothetical protein from Sinorhizobium meliloti 1021

Subject, 297 a.a., MscS mechanosensitive ion channel (RefSeq) from Shewanella loihica PV-4

 Score = 76.6 bits (187), Expect = 1e-18
 Identities = 63/243 (25%), Positives = 110/243 (45%), Gaps = 20/243 (8%)

Query: 282 IFRNVLAVFIGAVTVLTILSGLGVQIAPLIAGAGIFGVAIGFGSQTLVKDVLSGVFYMLD 341
           +F  +  +   A+ ++T L  L + I      +G   + +GFG+Q ++ + +SG   M +
Sbjct: 64  LFSRIYLILAIAIILVTSLEILNIPIKAFAFVSGAVAIGVGFGAQNIINNFISGWILMWE 123

Query: 342 DAFRVGEYIQSGSYKGTVESFSLRSVRLRHHRGPIFTVPFGELGAVQNMSRDWVI----- 396
              R+G++++ G  KG VES + RS  +R + G    VP  +L  ++N   +W +     
Sbjct: 124 RPIRIGDFLEIGETKGVVESINTRSTLIRRNDGVHMLVPNSQL--LENTVTNWTLIDNIA 181

Query: 397 -DKMTLNVTYDADVDLARKLIKKVGQELAADPEFAADTIEPLKMQGVDSFGDFAIVLRMK 455
              + + V Y +DV+    +IK+   E     E    T  P+ +   + FGD A++    
Sbjct: 182 RSTVRVGVAYGSDVERVADIIKQTLDE----HEEILTTPSPVAI--FEDFGDNALIFDGI 235

Query: 456 LMTKPGAQFTIKR---RAFMMIKKAFDENGIKIAVP--TVHVSGGSDNAAAAQQALNMSK 510
                  +  I+R        I K F + GI IA P   +H+  G      AQ+  +  K
Sbjct: 236 FWVCANTEADIRRIRSDIRFRIYKLFTQAGIVIAFPQRDLHLD-GELKIVKAQRGNSEDK 294

Query: 511 AAE 513
           AAE
Sbjct: 295 AAE 297