Pairwise Alignments

Query, 523 a.a., hypothetical protein from Sinorhizobium meliloti 1021

Subject, 274 a.a., MscS mechanosensitive ion channel (RefSeq) from Shewanella loihica PV-4

 Score = 76.3 bits (186), Expect = 1e-18
 Identities = 63/223 (28%), Positives = 104/223 (46%), Gaps = 17/223 (7%)

Query: 277 RTLLPIFRNVLAVFIGAVTVLTILSGLGVQIAPLIAGAGIFGVAIGFGSQTLVKDVLSGV 336
           +T++    N+    +   TV+  L  +GVQ A L+A  G  G+A+G   Q  + +  SGV
Sbjct: 54  KTVVSFVANMAWALVFVFTVIATLGQIGVQTASLVAVIGAAGLAVGLALQGSLSNFASGV 113

Query: 337 FYMLDDAFRVGEYIQSGSYKGTVESFSLRSVRLRHHRGPIFTVPFGEL--GAVQNMS--R 392
             +L    RVG+YI++    GTV+  ++ S +LR     +   P   +  G + N S   
Sbjct: 114 LMVLFRPCRVGDYIEAAGIAGTVDEITIFSTKLRTPDNKVIVAPNSSIMNGTITNYSAME 173

Query: 393 DWVIDKMTLNVTYDADVDLARKLIKKV---GQELAADPEFAADTIEPLKMQGVDSFGDFA 449
              ID + + V+YDAD+   ++++K+V      +  DP +     E       DS  +F 
Sbjct: 174 TRRID-LVIGVSYDADLKQTKEVLKQVLDNNAYILKDPAYTVALTEL-----ADSSVNFV 227

Query: 450 IVLRMKLMTKPGAQFTIKRRAFMMIKKAFDENGIKIAVPTVHV 492
           +   +K      A+F I  +    IK A DEN I I  P + +
Sbjct: 228 VRPWVKGSDYWPARFEILEQ----IKLALDENNIGIPYPQMDI 266