Pairwise Alignments

Query, 601 a.a., ABC transporter permease from Sinorhizobium meliloti 1021

Subject, 541 a.a., iron ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

 Score =  103 bits (258), Expect = 1e-26
 Identities = 132/584 (22%), Positives = 236/584 (40%), Gaps = 92/584 (15%)

Query: 42  KAAVLVLLTALVAAPLLKVFGATLAPGAWSAWSDVLASNLSRNLFWLPLANTMILGAGVA 101
           KA+ LVL T LV  P+L +F            SD + ++L   +    + NT++L   V 
Sbjct: 9   KASSLVLTTLLVL-PILAIFYTAFGN------SDEVFAHLLATVMPTYIFNTLVLTCSVL 61

Query: 102 TGCVLVGGFLAWLVVMTDVPFRRTIGLLATLPFMIPSFATALAWGSLFRNARVGGQIGFL 161
              +L G   AWL+ M  +P  R +     LP  +P++      G LF +        + 
Sbjct: 62  LLALLFGVPSAWLIAMCKLPGERWLQWALVLPLAMPAYII----GYLFTH-----WFDYA 112

Query: 162 EGLGFSVPDWLAW-----------GMVPTLVVLMAHYYSLAFTVIAAALATVNSDLVEAA 210
             +  ++ DW  W            +    VVL    Y   + +  AA    N  L+++A
Sbjct: 113 GPIQIALRDWTGWQAGSYWFPDIRSLGGASVVLALVLYPYVYLLCRAAFMEQNVTLLQSA 172

Query: 211 QMTGAGRRRIFLGIVLPVALPALVAGASLTFAGAVSNFAAPALLGLPVRMQTLATRLY-- 268
           ++      + F  I LP+A PA+  G SL     + +F   +L      + TL T +Y  
Sbjct: 173 RLLKCSPWQSFRRISLPLARPAIAVGLSLVAMETIGDFGTVSLFA----VNTLTTAVYDT 228

Query: 269 --GMIEIGQAERGYVLAILLILVSAFFLWAGNRVISGRRSYATITGKGGRSKRFALGTAR 326
             G   +  A +  + AI+L++V    L +  R    R+             R+ L   R
Sbjct: 229 WLGYSNLNAAAK--ISAIMLVMV--LLLLSSERYSRRRQKLYQTQFNSHEEYRYTLKGWR 284

Query: 327 L-PLFVAAASICVLTTVVPVVILIA---SSLAPSSSALFSDWSLHYWIGASDPAIARGQA 382
           L    +    +  +  ++P++ LI+   +  A S +  F +++++               
Sbjct: 285 LWAALIWCWGLVAVAFILPLLQLISYAWTYFAQSWTTQFKEYAIN--------------- 329

Query: 383 GIWNNPLILSATGVTVGLGVTVAFSASLVGLLVAFV---LARSRSGFLSAAINQISFLPL 439
                               TV+ SA++V +LVA V    AR ++   S A+ ++S +  
Sbjct: 330 ------------------SFTVSISAAVVAVLVALVANFYARLQNNRTSVALMRLSSMGY 371

Query: 440 LVPG--IAFGAAY-VALLGAPIGPLPALY----------GTFLLLVIAATAYLVPFAVQT 486
            VPG  +A G    V  L   I  +  +           G+   +V A        A+ +
Sbjct: 372 AVPGTVLAIGILVPVLALDHLINDIAKMMEWGRPGLVFSGSLFAIVFALVVRFSAVAIGS 431

Query: 487 GRAVIQQVSGDLDESARMTGAGFLRRLFAITVPLAIRGLSAGALIVFVKIVRDLSLVVLL 546
             + + +VS  LD +AR  G    + L  + +PL  RG     L+VF++ +++L+  +LL
Sbjct: 432 IESSLSKVSPSLDMAARTMGCHANQMLKRVHLPLIRRGALIAGLLVFIESMKELNAAILL 491

Query: 547 FTPTMPLLSVLAYRYASDGFTQFANALTVVVLVISVAATLFANR 590
                  L+   Y YASD   + A    ++++++ +   +  NR
Sbjct: 492 RPFNFETLATYVYNYASDERLELAALPAILLVLVGLIPLVMVNR 535