Pairwise Alignments

Query, 601 a.a., ABC transporter permease from Sinorhizobium meliloti 1021

Subject, 580 a.a., phosphonate ABC transporter permease from Herbaspirillum seropedicae SmR1

 Score =  124 bits (311), Expect = 1e-32
 Identities = 152/598 (25%), Positives = 250/598 (41%), Gaps = 63/598 (10%)

Query: 22  STQSRNRSFKDAFLSPGLGLKAAVLVLLTALVAAPLLKVFG-ATLAPGAWSAWSDVLASN 80
           ST +R  S  D        LK  +L+LL   +  PLL +   A L P    A S   A  
Sbjct: 19  STSTRPASVPDRSQWLPALLKWLLLMLLALGLVGPLLFILAQAVLTPAGEWAGSRPFAQ- 77

Query: 81  LSRNLFWLP-LANTMILGAGVATGCVLVGGFLAWLVVMTDVPFR---RTIGLLATL-PFM 135
           L  N+ +LP L  ++ + A  A   V +    A+ +  T +P +   R IGLL  L P +
Sbjct: 78  LFANINFLPMLGRSLWVSAMTAVVTVPLAYVFAYALQRTCIPGKGLWRGIGLLPLLAPSL 137

Query: 136 IPSFATALAWGS--LFRNARVGGQIGFLEGLGFSVPDWLAWGMVPTLVVLMAHYYSLAFT 193
           +P  A    +G+  LF+    G   GF             WG+   L+  + + +  A  
Sbjct: 138 LPGIALIYLFGNQGLFKEWMDGSIYGF-------------WGI---LLGEVFYTFPHALM 181

Query: 194 VIAAALATVNSDLVEAAQMTGAGRRRIFLGIVLPVALPALVAGASLTFAGAVSNFAAPAL 253
           ++ +AL+  +  L +AAQ  GA R RIF  + LP     +     L F   +++F  P +
Sbjct: 182 ILLSALSQADGRLYDAAQAMGASRWRIFTTVTLPATRYGIFGALCLVFTLTITDFGVPKI 241

Query: 254 LGLPVRMQTLATRLYGMIEIGQAERGYVLAI-LLILVSAFFLWAGNRVISGRRSYATITG 312
            G       LA   Y  + +GQ + G    I LL+LV A   +  +  +  RR  A+++ 
Sbjct: 242 TG--GAYSVLAVEAYKAV-VGQQQFGRGALIGLLLLVPALLTFTLDAWLQ-RRQRASMSS 297

Query: 313 KGGRSKRFAL-------GTARLPLFVAAASICVLTTVVPVVILIASSLAPSSSALFSDWS 365
              RS+ +         G   L + + A++I ++     +V+ + +SL            
Sbjct: 298 ---RSETYVPQPDWRRDGANLLAVALIASAILMM-----IVVAMGASLVKLWPYNLQLTL 349

Query: 366 LHYWIGASDPAIARGQAGIWNNPLILSATGVTVGLGVTVAFSASLVGLLVAFVLARSRS- 424
            HY     D     G    WN+  +   T V    G  + F         A+++ ++R  
Sbjct: 350 QHYDFDNMDGG---GWLAYWNSLRLACGTSVA---GTLLIFCG-------AWLMEKTRGQ 396

Query: 425 GFLSAAINQISFLPLLVPGIAFGAAYVALLGAPIGPLPALYGTFLLLVIAATAYLVPFAV 484
            +LS  +  + FLP+ VPG+  G   +     P  P   LYGT  LLV+    +    A 
Sbjct: 397 AWLSTLLRMLCFLPMAVPGLVLGLGSLLFFNHPANPFNFLYGTMTLLVLCCVVHFYTTAQ 456

Query: 485 QTGRAVIQQVSGDLDESARMTGAGFLRRLFAITVPLAIRGLSAGALIVFVKIVRDLSLVV 544
            T    ++Q+  + + ++       L+    +TVPL +  L      +FV  +  +S V+
Sbjct: 457 LTAVTALKQLDPEFEAASLSLKVPLLKTFIRVTVPLCLPQLLEIFRYLFVSSMTTVSAVI 516

Query: 545 LLFTPTMPLLSVLAYRYASDGFTQFANALTVVVLVISVAATLF----ANRLQAKSQPW 598
            L+ P   L SV        G    A A++ ++L+ S AA+L       R  A++Q W
Sbjct: 517 FLYRPDTVLASVAVLNMDDAGDVGPAAAMSTLILLTSAAASLLMHLGGRRWLARAQAW 574