Pairwise Alignments

Query, 228 a.a., ABC transporter permease from Sinorhizobium meliloti 1021

Subject, 337 a.a., polar amino acid ABC transporter, inner membrane subunit (RefSeq) from Desulfovibrio vulgaris Miyazaki F

 Score =  139 bits (351), Expect = 5e-38
 Identities = 79/215 (36%), Positives = 128/215 (59%), Gaps = 13/215 (6%)

Query: 2   DYTFQFGPL----LNYLPQIVSGLWLTIGLSFVGIFGGIALGIFCAVMSTLSSPIPRLLV 57
           D+T++   L    LN    ++ GLW+T+ +S + I GGI +G+   +     +P+ R   
Sbjct: 108 DFTYRGDVLGRYQLNRPGILLEGLWITLEVSVLAIIGGIVIGVVTGLCRISINPMLRWGA 167

Query: 58  RLYVEVVRNTPLLVQIFVIFFG--------LPNIGIR-LSPLTSVFIALVLNNGGYVAEI 108
             Y+E++R +PLLVQIF+ +F         L ++G+  +SPL    +AL L  G YVAEI
Sbjct: 168 ITYIEIIRGSPLLVQIFLWYFVVGTLINALLEHVGLGGISPLWYGVMALALFTGAYVAEI 227

Query: 109 VRGGIEATHRSQVEAAESLGLSYFQTLRYVILPPALEKVFTPVVSQCVLLMLSTSLVSAI 168
           VR GI++ HR Q+EAA SLG++Y Q +R VILP A  ++  P+  Q + L+  +SL+  I
Sbjct: 228 VRAGIQSVHRGQMEAARSLGMNYAQAMRKVILPQAFRRIMPPLAGQFISLIKDSSLLGVI 287

Query: 169 GVEDLTGAAMIASSETFRTMEIYLVVAMVYVVLNF 203
            + +LT A     + + +  E+++V A++Y+VL F
Sbjct: 288 AIRELTKATREVVTTSLQPFELWIVCAVLYLVLTF 322