Pairwise Alignments

Query, 228 a.a., ABC transporter permease from Sinorhizobium meliloti 1021

Subject, 337 a.a., amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score =  137 bits (346), Expect = 2e-37
 Identities = 77/215 (35%), Positives = 124/215 (57%), Gaps = 13/215 (6%)

Query: 2   DYTFQFGPLLNYLPQ----IVSGLWLTIGLSFVGIFGGIALGIFCAVMSTLSSPIPRLLV 57
           DY +   P+  Y       ++ GLW+T+ +S + I  GI LG+   +     +P  R L 
Sbjct: 108 DYIYSGDPVGRYEVSKPGILLEGLWITLEVSMLAIIIGIVLGVVTGLARISVNPALRWLA 167

Query: 58  RLYVEVVRNTPLLVQIFVIFFGL--------PNIGIR-LSPLTSVFIALVLNNGGYVAEI 108
             Y+E++R +PLLVQ+F+ +F +          +G+  + PL    +AL +  G YVAEI
Sbjct: 168 ITYIEIIRGSPLLVQVFLWYFVVGTLLNALFEKVGLSAIPPLWYGVMALAIFTGAYVAEI 227

Query: 109 VRGGIEATHRSQVEAAESLGLSYFQTLRYVILPPALEKVFTPVVSQCVLLMLSTSLVSAI 168
           VR GI++ HR Q+EAA SLG+SY Q++R VILP A  ++  P+  Q + L+  +SL+  I
Sbjct: 228 VRAGIQSVHRGQMEAARSLGMSYAQSMRKVILPQAFRRIMPPLAGQFISLVKDSSLLGVI 287

Query: 169 GVEDLTGAAMIASSETFRTMEIYLVVAMVYVVLNF 203
            V +LT A     + + +  E+++V A++Y+VL F
Sbjct: 288 AVRELTKATREVVTTSLQPFELWIVCALLYLVLTF 322