Pairwise Alignments

Query, 338 a.a., ABC transporter permease from Sinorhizobium meliloti 1021

Subject, 314 a.a., Binding-protein-dependent transport systems inner membrane component (NCBI) from Rhodospirillum rubrum S1H

 Score =  201 bits (512), Expect = 2e-56
 Identities = 116/318 (36%), Positives = 173/318 (54%), Gaps = 7/318 (2%)

Query: 23  LVVFITRRFAVTIPLLLIISFGVFALIHIAPGDPVSSLLGARASDPAT--LAAIRARYHL 80
           +V F+ +R A+ +P+LL  S  +F ++ + P DP    L      P    LA  R R  L
Sbjct: 1   MVSFVLKRLALLVPMLLGASLVIFLMLRLGPSDPAMDYLRLSRIPPTVQALAETRQRLGL 60

Query: 81  DDSLLVQYGTWLSQVIRGDLGVSILGNRSVTSTIADRLGVTIFLSLMSTTLVLGLGILLG 140
           D  L VQY  WL++ +  D GVS    R V   +   L  T+ L+ ++  L LGL I LG
Sbjct: 61  DQPLAVQYWVWLNKALHLDFGVSYATGRPVLPDLLHYLPATLHLAGVALALTLGLSIPLG 120

Query: 141 ALAAFRRGTGLDRTVVMFSVFGISSPAFVTGIFFLYVFGVLLHWFPTFGAGTGFLDRAWH 200
             AA RR    D+ V   +  G+S P F  G   + VF V L W P  G G      A H
Sbjct: 121 MWAARRRDALPDQIVRGVAFLGVSMPNFWLGFLLVLVFSVELGWLPAMGRGG-----AEH 175

Query: 201 LALPALALAASTMAIVVKITRAAVIEELARDYVTFARARGVSSRRILLAYVLRNSLIPVI 260
           + +PA+A+A  +++I  ++ RA+++E   + +V +AR RG+S+ ++  A++LRN+L+P+I
Sbjct: 176 MIMPAVAIAFMSLSINARLLRASMLEVSGQRHVYYARLRGLSAAKVERAHILRNALLPII 235

Query: 261 TAAGLIVIGILAGAIYVEVTFSLPGLGALMIDAVQKRDIPTIQGITLLFSAFVVLVNLAV 320
           TA G+ V  ++ G + +E  F  PG+G   + A+  RD P IQ  TLL     VL NL V
Sbjct: 236 TATGMHVGELIGGTLVIESIFGWPGVGRFAVSAIFNRDYPVIQCFTLLMVLIFVLCNLIV 295

Query: 321 DVIYTLIDPRIRFGRVGS 338
           D++Y   DPRIR    G+
Sbjct: 296 DIVYAWADPRIRLAAEGA 313