Pairwise Alignments

Query, 534 a.a., ABC transporter substrate-binding protein from Sinorhizobium meliloti 1021

Subject, 520 a.a., oligopeptide/dipeptide ABC transporter, periplasmic oligopeptide/dipeptide-binding protein (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score =  147 bits (370), Expect = 1e-39
 Identities = 132/523 (25%), Positives = 230/523 (43%), Gaps = 40/523 (7%)

Query: 7   RRSILAAGMAHAAFVSVTGTFVIARAAKAAEQIELVTWALPSIPDTLFIPHAWTTYTGAI 66
           +R I    +A AA +++ G   IA AA+     +    A+ S P++L  PH     +G I
Sbjct: 2   KRLIALLSLALAAMLALGG---IANAAEG----KTFRIAMASDPESLD-PHM--QLSGPI 51

Query: 67  MSL---VQEGLLGFGEDLGLETALADRWEEVDPTTIKYHLRGGVKFGDGSPLAADDIVAT 123
           ++    V + L+ +  D+  E  LA++WE+++PTT+++HLR GVKF  G+P  A D+  T
Sbjct: 52  LAYSHWVFDPLVRWTPDMKFEPRLAEKWEQINPTTMRFHLRKGVKFHSGNPFTAKDVAWT 111

Query: 124 F-KYHMSPDSPSQLASFYNSVA----TVEATAPDEVTVKLKAPNVQFAFTPAHMAGFVFK 178
             +   SPD       F         T++    +   + +      F        G   K
Sbjct: 112 LDRLKKSPDFKGLFIKFAEPKVIDDNTIDIITTEPYGLVMNLATYIFPMDSKFYTGTDAK 171

Query: 179 ---KEQLADKNIGTPEALPLGTGAYKLVEFVPTDRVILEARDDYSGPKPAVKRITFKAIP 235
              K+ +             GTG Y + E     ++IL+A   Y G +  V  I    I 
Sbjct: 172 GQPKDAIVKSGYSFANDNASGTGPYSVAEREQGVKLILKANKGYWGKRGNVDTIELTPIK 231

Query: 236 DRPARLLAMQQGEIDGTFDLAISDIDQWKALGNVDVVAAPSLGVYLLTLDHSA-PPFDDI 294
           +   R+ A+ +G++D    + + D DQ     +V+++  PS  +  + L+    P F D 
Sbjct: 232 NEATRVAAILKGDVDFISPVPVQDYDQLSKNADVELITMPSARIITIQLNQKKFPQFADK 291

Query: 295 HVRRAVAYSVDRNGLVQALLKGNGEAATALNPPEIWSGVLPPDEVRAFYATLLPNYAFDL 354
            VR A+  + D  G+V  ++KG     T    P+ ++G         + A L P Y  +L
Sbjct: 292 RVREAIIAATDTAGIVAKVMKGY-TTTTQQQAPKGFAG---------YIADLKPRY--NL 339

Query: 355 NKAKAELAQSNHPDGFDVTIPASTADPYM--VNILQSVTENLKQIGIRAHIQESDNNTWF 412
           + AK  +  +    GF+V++ A   + Y+    I Q+    + +I I+ +++      ++
Sbjct: 340 DNAKKLMKDAGFEKGFEVSMIAPN-NRYVNDEKIAQAFVSMMARINIKVNLKTMPKAQYW 398

Query: 413 TNYVTHDKLGMQIMAYYPDFADAANYPSLFFSSANAE--KGGMNGSNFNNREVDAKLKIA 470
             +       +Q++ ++PD  D ANY      + N +   G  N  N+ N + DA +  A
Sbjct: 399 DQF-DAQVADIQMIGWHPDTEDTANYSEYLLMTPNKDTGMGQYNSGNYANPKFDALIDAA 457

Query: 471 NENADPKARADALKKVFTIANEEVAVVPIFWPASAMAINNKYK 513
           N   DP  R   LK+   +A  + A VP+ W   + A     K
Sbjct: 458 NRETDPAKRDALLKESEQMAYNDAAFVPLHWEPLSWAARKTVK 500