Pairwise Alignments

Query, 373 a.a., hypothetical protein from Sinorhizobium meliloti 1021

Subject, 361 a.a., AI-2E family transporter from Vibrio cholerae E7946 ATCC 55056

 Score =  146 bits (369), Expect = 8e-40
 Identities = 107/345 (31%), Positives = 170/345 (49%), Gaps = 37/345 (10%)

Query: 18  ALGLLAIGCTLVLWPFLSAILWAAVICFSTWPAYRLFERAVGGYRALAAAAMTVLVVVVI 77
           AL   A+ C  ++ P++++I+ A +I    +P +  FE+ +  +  LAA    V++ V+I
Sbjct: 17  ALLASALACYWLVEPYINSIIMAFIISLLMFPIHDWFEKKLPSHNNLAAFLSCVVLTVII 76

Query: 78  VAPLALLATTLADNIS----SLVAGVTHVLEQGPPAPPDWVRGLPIAGEGLATYWEGLAH 133
           V PL  +   +    S    +L A VT    Q     P  V+GL +A   L   +E ++ 
Sbjct: 77  VIPLLFIFGAIVQQGSKFSQNLYAWVTQGGIQALFNHPWVVKGLSLANHYLP--FEEISP 134

Query: 134 NAPAFTIELKKVIGPFADVALIGGTLFGAGLLELA---------------LSIFIGFFLF 178
                  ++ + IG FA       T FG+ L+ ++               L +F+ FFL 
Sbjct: 135 Q------QIAQRIGQFA-------TTFGSNLVSISAKILGDATSFVMHFFLMLFVLFFLL 181

Query: 179 LHGRRMTALTRQIAERVAGARARRLLSVVGVTVTGVVYGLIGTALAQGLLAGVGFWIAGV 238
               ++ +  R I   ++ ++  RLLS +       V G   TA+AQG+  G+G W+AG 
Sbjct: 182 RDHDKIISAIRHILP-LSRSQEDRLLSEIENVSKSAVMGSFLTAIAQGVAGGIGMWLAGF 240

Query: 239 PQALLLGCLTFVLSFVPA-GPPFVWGPVALWLFMQESVWWGIFVAIWGLLLVSSIDNFLR 297
           P  L  G +    SF+P  G   +W P  L+LF+     W IF+AIW + +V SIDN LR
Sbjct: 241 P-GLFWGTMMGFASFIPVVGTALIWIPATLYLFLTGDTTWAIFLAIWSVAVVGSIDNLLR 299

Query: 298 PYLLGRNTNLPVLLGLFGLIGGVLAFGLIGLFLGPTLLAVAHSLF 342
           P+L+  +  +  L+  F L+GG+  FGLIGL  GP + A+   LF
Sbjct: 300 PFLMQGSAGMNTLMIFFSLLGGIQLFGLIGLIYGPLIFAITMVLF 344