Pairwise Alignments

Query, 373 a.a., hypothetical protein from Sinorhizobium meliloti 1021

Subject, 321 a.a., AI-2E family transporter from Methanococcus maripaludis S2

 Score = 85.9 bits (211), Expect = 1e-21
 Identities = 68/321 (21%), Positives = 144/321 (44%), Gaps = 26/321 (8%)

Query: 29  VLWPFLSAILWAAVICFSTWPAYRL----FERAVGGYRALAAAAMTVLVVVVIVAPLALL 84
           +LWPF+  I  A  + + T P Y +    F R  G    L    +  L++VV+VA   ++
Sbjct: 11  MLWPFMGIIALAVAVAYMTKPLYDILKPKFGRTYGAIICLLGIVIPSLLLVVLVAE-DVV 69

Query: 85  ATTLADNISSLVAGVTHVLEQGPPAPPDWVRGLPIAGEGLATYWEGLAHNAPAFTIELKK 144
              L+ +I +++  VT +L        D     P   +  +  W        +F  ++  
Sbjct: 70  TFLLSLDIENIITKVTPILNDIGYLRVDG----PDVSKPFSDIWSVSKPLLNSFASQISS 125

Query: 145 VIGPFADVALIGGTLFGAGLLELALSIFIGFFLFLHGRRMTALTRQIAERVAGARARRLL 204
           +                + L++L    F+ F+    G ++T                  L
Sbjct: 126 I---------------PSLLMKLLFLSFMTFYFLKDGDKLTDSFLIYVPEDKKRNTALFL 170

Query: 205 SVVGVTVTGVVYGLIGTALAQGLLAGVGFWIAGVPQALLLGCLTFVLSFVP-AGPPFVWG 263
           S +   +  +  G   T++  G+++ +G+W+ G+P  + LG L+ +L+ +P  G   ++ 
Sbjct: 171 SEIHKALKTLFIGNAVTSVIVGIISIIGYWLIGIPNPITLGALSGILNILPVVGGWTIYV 230

Query: 264 PVALWLFMQESVWWGIFVAIWGLLLVSSIDNF-LRPYLLGRNTNLPVLLGLFGLIGGVLA 322
           P+ ++  +   +  GI + ++G++ +S   +F +RP ++ ++ +L   L L   + G L 
Sbjct: 231 PLTVYYLLTGEIAKGILLGLFGIIFLSLAPDFAIRPRVISKDGDLHPALVLIAFLIGPLV 290

Query: 323 FGLIGLFLGPTLLAVAHSLFR 343
           FG+ GL +GP ++A  +++ +
Sbjct: 291 FGIPGLAIGPIIVATVYAIHK 311