Pairwise Alignments

Query, 276 a.a., TRm1b transposase from Sinorhizobium meliloti 1021

Subject, 278 a.a., Integrase, catalytic region from Pseudomonas syringae pv. syringae B728a

 Score = 45.4 bits (106), Expect = 1e-09
 Identities = 54/231 (23%), Positives = 97/231 (41%), Gaps = 26/231 (11%)

Query: 51  YGYRRVHAILRRNARKLGRSWPNAKRVYRVMK---LHNLLLVR-------HTGAVDDRLH 100
           YGYRR+ A LRR    +     N K V ++M    L +L+ V+        TG     L 
Sbjct: 54  YGYRRITAALRRAGHLV-----NHKTVQKLMGQLGLKSLIRVKKYRSYKGETGKAAPNLL 108

Query: 101 EGQVAVERSNIRWCSD--GFEIGCDNKEKVRVAFALDCCDREAIAHVATTEGIKSQDVQD 158
           +     +  N +W +D   F++G    +K+ ++  +D    E I++      I  + +  
Sbjct: 109 KRDFKAQYLNQKWATDVTEFKVG---GQKLYLSPIMDLYSGEIISYA-----IARRPLYS 160

Query: 159 LVITAVENRFGRINMLSEPIEWLTDNGSCFVARDTASLLRDIGMEPCTTPVRSPQSNGMA 218
           +V   +E  F R+    +PI   +D G  +       LL +  +    +   +   N   
Sbjct: 161 MVDEMLEGAFKRLGPHEKPILH-SDQGWQYRMPIYQRLLNENSIAASMSRKGNCYDNAAI 219

Query: 219 EAFVKTFKRDYVSVNPTPDAETVMAQLPFWFEHYNNLHPHSALGYQSPREF 269
           E+F  T K ++  +N   D + + A +  + E+YN+      L   SP E+
Sbjct: 220 ESFFSTLKSEFFYLNKFNDLDELQAGIEEYIEYYNHSRIKLKLNGLSPVEY 270