Pairwise Alignments

Query, 346 a.a., ATP-dependent DNA ligase from Sinorhizobium meliloti 1021

Subject, 914 a.a., DNA ligase D from Rhodopseudomonas palustris CGA009

 Score =  187 bits (476), Expect = 7e-52
 Identities = 126/335 (37%), Positives = 173/335 (51%), Gaps = 33/335 (9%)

Query: 15  AKSKPARPRDPAQPNLPFDP-----MAERIEPCLALLKPVPPKGPDWVFEVKWDGYRLAI 69
           AK+K A+   PA  + P        M + + P L      PP G  W  E+K+DGYR+ +
Sbjct: 244 AKAKAAKSAKPASRSKPAAQGKRAAMPDFVPPQLCTSVERPPGGEGWGHEIKFDGYRMQL 303

Query: 70  HIEPKGVRIITRGGHDWTHRFPAIAEATSKLGVGTAILDGEAVVLDEEGRSDFGALQRSL 129
            +E    R++TR G DWT +F AIA+  + L    AI+D E V LD  G+ DF +LQ +L
Sbjct: 304 RVEHGEARLLTRKGLDWTAKFGAIADEAASL--PDAIIDTEVVALDSHGQPDFASLQAAL 361

Query: 130 GGRGGKRSSTES-VFFAFDLLYFDGHDLSGTELSVRRHLLEGFLDGPTGAIQSS----EE 184
                    TE+ + FAFDLLY DG DL G  L+ R+  L   L    G  +       E
Sbjct: 362 SD-----GHTENLICFAFDLLYVDGEDLRGLPLAERKARLAALLKAARGRRKEGLIRYVE 416

Query: 185 VF--GDGALLEKACSMGLKGIIAKHRDWPYRSGRTGDWLKIKCLQSESFMIVGYEQSLTA 242
            F  G  A+L+ AC + L+GI++K  D  YRSGR+  W K KC      +I G++   T 
Sbjct: 417 HFDTGGDAILQSACKLSLEGIVSKKLDAAYRSGRSDGWTKAKCRAGHEVVIGGWK---TT 473

Query: 243 RGGLGSLLLAGRKGHDWIYVGSVGTGFNTKDAEYLRKTLDRLKTSK--------PAVPLK 294
            G   SLL+   +G D  YVG VGTGF     + +++ L  LK  K           P K
Sbjct: 474 NGKFRSLLVGVHRGDDLAYVGIVGTGFG---QDVVKRILPELKAHKADTSPFSGANAPKK 530

Query: 295 GKNLVFAQPTLIAEIEFRGWTHDGSLRHASYKGLR 329
            + + +  P L+AEIEF G+T  G +R AS+KGLR
Sbjct: 531 TREVHWVTPDLVAEIEFAGFTGAGMVRQASFKGLR 565