Pairwise Alignments

Query, 346 a.a., ATP-dependent DNA ligase from Sinorhizobium meliloti 1021

Subject, 621 a.a., ATP-dependent DNA ligase from Rhodopseudomonas palustris CGA009

 Score = 52.0 bits (123), Expect = 4e-11
 Identities = 70/228 (30%), Positives = 97/228 (42%), Gaps = 40/228 (17%)

Query: 23  RDPAQPNLPFDP--MAERIEPC-LALLKPVPPKGPDWVFEVKWDGYRL-AIHIEPKG--- 75
           RDPA    PF P  +A  I+    A + P      D++ E KWDG R+ A+  + +    
Sbjct: 260 RDPA----PFRPVMLAHAIDDTDFAAINPA-----DYIAEWKWDGIRVQAVSGQNEHGDT 310

Query: 76  -VRIITRGGHDWTHRFPAIAEATSKLGVGTAILDGEAVVLDEEGRSDFGALQRSLGGRGG 134
            VR+ +R G D T  FP +  +    G     +DGE +VL ++    F  LQ+ L  +  
Sbjct: 311 VVRLYSRSGEDITMSFPDLLPSLHLPGA----IDGELLVLRDKRVQSFNVLQQRLNRKSV 366

Query: 135 KRSSTESV---FFAFDLLYFDGHDLSGTELSVRRHLLEGF---LDGPTGAIQSSEEVFGD 188
               T+       A+DLL     DL     + RR  LE F   LD P   + S    F D
Sbjct: 367 TPKLTKDYPIHLRAYDLLGEGDEDLRTLPFAERRARLETFIARLDDPKVDL-SPIVTFDD 425

Query: 189 GALLEKA----CSMG-------LKGIIAKHRDWPYRSGR-TGDWLKIK 224
              L  A     S G       ++G++ K RD  Y  GR  G W K K
Sbjct: 426 WEALRAARRDPASAGAGLDADAVEGVMLKRRDALYLPGRPKGQWWKWK 473