Pairwise Alignments

Query, 346 a.a., ATP-dependent DNA ligase from Sinorhizobium meliloti 1021

Subject, 867 a.a., DNA ligase D from Ralstonia sp. UNC404CL21Col

 Score =  189 bits (480), Expect = 2e-52
 Identities = 122/347 (35%), Positives = 173/347 (49%), Gaps = 30/347 (8%)

Query: 5   AKPLLQDDSVAKSKPARPRDPAQPNLPFDP----MAERIEPCLALLKPVPPKGPDWVFEV 60
           AKP  +  + A    A    PAQ   P       +   +EP LA L   PP   +W +EV
Sbjct: 194 AKPKAKGRAKADGGKAEHSKPAQVQPPAGAVPATLPRTLEPQLATLVDGPPTQGEWDYEV 253

Query: 61  KWDGYRLAIHIEPKGVRIITRGGHDWTHRFPAIAEATSKLGVGTAILDGEAVVLDEEGRS 120
           K+DGYR+   I+   VR+ +R G DWT + P  A     LG+  A LDGE VV+ E G  
Sbjct: 254 KFDGYRILARIDGNTVRLFSRNGRDWTAKLPRQARTLPALGLREAWLDGEVVVMGERGVP 313

Query: 121 DFGALQRSLGGRGGKRSSTESV-FFAFDLLYFDGHDLSGTELSVRRHLLEGFLDGPTGAI 179
           DF ALQ +      + +  E + ++ FD+ + +G DL G  L  RR LL+   +   G +
Sbjct: 314 DFQALQNAF-----ETAHAEHIAYYLFDIPFCNGMDLRGVPLRERRALLQRIFEAAPGDL 368

Query: 180 QSSEEVF------GDGALLEKACSMGLKGIIAKHRDWPYRSGRTGDWLKIKCLQSESFMI 233
                +F          LL  ACSM L+G+I K  D PYR+GR+  W+K+KC Q + F+I
Sbjct: 369 DRDAVLFSGTFNAAPEDLLSSACSMSLEGVIGKRADAPYRAGRSPAWIKLKCGQRQEFVI 428

Query: 234 VGYEQSLTARGGLGSLLL-----AGRKGHDWIYVGSVGTGFNTKDAEYLRK-----TLDR 283
            GY     +R G G+LLL     AG+      Y G VGTGFN      L       T+D 
Sbjct: 429 GGYSAPKGSRSGFGALLLGVYDDAGKLR----YAGRVGTGFNETSLHALHHELTGLTIDT 484

Query: 284 LKTSKPAVPLKGKNLVFAQPTLIAEIEFRGWTHDGSLRHASYKGLRE 330
              + P      +++ + +P  +AEI F  WT +G +R A ++GLR+
Sbjct: 485 PPFANPPTGSDARDVQWVKPERVAEIAFAEWTREGIVRQAVFQGLRD 531