Pairwise Alignments

Query, 266 a.a., ABC transporter permease from Sinorhizobium meliloti 1021

Subject, 275 a.a., ABC-type spermidine/putrescine transport system, permease component II from Pseudomonas stutzeri RCH2

 Score =  145 bits (366), Expect = 9e-40
 Identities = 76/245 (31%), Positives = 136/245 (55%), Gaps = 3/245 (1%)

Query: 9   FVLWAFVTTALLMLSAPTVVVLGASFTAGNIITFPPDGLSLKWYGAIAQASDLRQAFVRS 68
           + L       LL L  P +V++  SF +G+ + +P  G S++WY A+  ++D  ++   S
Sbjct: 15  YALRILCALVLLFLIVPVLVIVPLSFNSGSFLVYPLQGFSMRWYEALFSSADWMRSLKNS 74

Query: 69  LIVATICTLVSIPVGTLAGIALAKYRVRFARSIQIYLLLPFTIPLIGSGIGMMLVLGNMG 128
           +++A   T +++ +GTLA + L +   R    +   L+ P  +P++  G+   L    +G
Sbjct: 75  MLIAPAATFLAVVLGTLAAVGLTRAEFRGKALLMTILISPMVVPVVIIGVASYLFFAPLG 134

Query: 129 VLGKLWPVGIACAVINLPFMIWAVTASASNLSPDLELAAANCGAPPLQRFLYITLPAVLP 188
           +      + +  AV+ +PF+I  V+A+    + +L  AAA+ GA PL  F  +TLP + P
Sbjct: 135 MGNSYLSLILVHAVLGVPFVIITVSATLQGFNYNLVRAAASLGASPLTAFFRVTLPLIAP 194

Query: 189 GVITGSLLMFILALNEFLVSLLLVDARSVTLPVQIYNSIRSIITPDLAAISVVFIACAGL 248
           GVI+G+L  F  + +E +V+L L     +TLP Q+++ IR  ++P +AA + + I   G 
Sbjct: 195 GVISGALFAFATSFDEVVVTLFLAGPEQITLPRQMFSGIRENLSPTIAAAATLLI---GF 251

Query: 249 AIALL 253
           +IALL
Sbjct: 252 SIALL 256