Pairwise Alignments

Query, 266 a.a., ABC transporter permease from Sinorhizobium meliloti 1021

Subject, 275 a.a., binding-protein-dependent transport systems inner membrane component (RefSeq) from Shewanella loihica PV-4

 Score =  100 bits (248), Expect = 4e-26
 Identities = 69/254 (27%), Positives = 128/254 (50%), Gaps = 24/254 (9%)

Query: 8   SFVLWAFVTTALLMLSAPTVVVLGASFTAGNIITFPPDGLSLKWYGAIAQASDLRQAFVR 67
           + +LW      +  L AP  +++  SF    ++T    G S KWYG + +   +  A   
Sbjct: 12  TLMLWG----GMFFLYAPMFILVFYSFNESKLVTVW-GGFSAKWYGELFRDDQILDAVAT 66

Query: 68  SLIVATICTLVSIPVGTLAGIALAKYRVRFARS-----IQIYLLLPFTIPLIGSGIGMML 122
           SL VA   + +++ +GT+A   +     RFARS     +   +  P  +P + +G+ ++L
Sbjct: 67  SLKVAFFASTMAVILGTMAAFVMT----RFARSWGKMTLSNMITAPLVMPEVITGLSLLL 122

Query: 123 VLGNMG-VLGKLWP-------VGIACAVINLPFMIWAVTASASNLSPDLELAAANCGAPP 174
           +  +M  +LG  WP       V IA +     ++   V++    L   +E AA + GA P
Sbjct: 123 LFVHMADLLG--WPAERGMLTVWIAHSTFCAAYVAVVVSSRLRELDMSIEEAAQDLGATP 180

Query: 175 LQRFLYITLPAVLPGVITGSLLMFILALNEFLVSLLLVDARSVTLPVQIYNSIRSIITPD 234
           L+ F +IT+P + P +I G LL F L+L++ +++       + TLP+ +++S+R  ++P 
Sbjct: 181 LKTFFHITVPMISPALIAGWLLSFSLSLDDLVIASFASGPGATTLPMVVFSSVRMGVSPK 240

Query: 235 LAAISVVFIACAGL 248
           + A++ + I    L
Sbjct: 241 INALATLIILIVSL 254