Pairwise Alignments

Query, 371 a.a., ABC transporter substrate-binding protein from Sinorhizobium meliloti 1021

Subject, 343 a.a., spermidine/putrescine ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

 Score = 58.5 bits (140), Expect = 3e-13
 Identities = 73/307 (23%), Positives = 129/307 (42%), Gaps = 26/307 (8%)

Query: 50  VRAWGGSWVD-ALKAGVSDSFTKMTGIAVRHDLTEDNEIQPKVWAAVAQKRVPPIHINWD 108
           V AWGG   + +LKA     F +  G+ + +   E+NE    ++  +   +     + + 
Sbjct: 27  VYAWGGYLPEKSLKA-----FEQQEGVTINYSTFENNE---SMYTKLKLLKGTGYDVVFA 78

Query: 109 TTTNATKSALRGVTEDL--SDLPNLKNATDLAKPVGLDGYPIVNTYGYVYV-----LAYR 161
           +     K    G+  ++  + +PN+K+A  +   +GL   P  N +   Y+     L Y 
Sbjct: 79  SAYFIEKMGREGLLAEIDHNQIPNMKDA--MPTVLGLAHDP-QNKFSLPYIWGITGLYYN 135

Query: 162 PSAFPNGAPKSWKDLLDPKLKGRIALYNDGIG-FHFPAQVAGGGKLEDIPANMQPAWDFI 220
            S  PNG  K W DL D + + ++ L +D    F    ++ G          ++ A++ +
Sbjct: 136 SSTLPNGITK-WADLWDKQYEQQVMLIDDIRDVFGMALKLNGFSINTKNEEEIKKAYESL 194

Query: 221 SKIKEQQPLLGEDPDFTTWFQKGEIDAACTISTNAREAKKNGIEIAWVVPEEGAKFDTDG 280
             +K+   L   D     +   GE       + NA + +    E+ +V+PEEGA    D 
Sbjct: 195 VALKKNVLLYNSDAPHVPYVS-GEATLGMQWNGNAYQGQVEMPELKFVMPEEGAVLWMDN 253

Query: 281 LWIPKGLPENELYWAKQYINHALTKEAQQIWLDGLGLPGVIPG--ITPPADLVGDPSYPT 338
             IP G     +  A ++IN     E Q   +  LG      G     PA+L  +P+   
Sbjct: 254 FTIPSG--SKNIPLAHKFINFMYQPENQAEIVQSLGYASATKGGRALLPAELRDNPTIFP 311

Query: 339 TEEDFKQ 345
           ++ED K+
Sbjct: 312 SDEDMKK 318