Pairwise Alignments

Query, 532 a.a., hypothetical protein from Sinorhizobium meliloti 1021

Subject, 411 a.a., putative multidrug efflux MFS transporter from Synechococcus elongatus PCC 7942

 Score = 94.7 bits (234), Expect = 6e-24
 Identities = 101/386 (26%), Positives = 169/386 (43%), Gaps = 29/386 (7%)

Query: 25  ATVLGNTGSFMRDVASAWLMTDLSASPAAVAMVQAAGTLPIFLLAIPAGVLTD------I 78
           A  + + GSF   +A  WL+ D++  P  +A+  A  +LP   L+  AG LTD      +
Sbjct: 25  AAGVSSIGSFAGIIAKGWLIQDMTQQPLLLAVNFACLSLPAVFLSPHAGTLTDRIGSESV 84

Query: 79  LDRRKFLIAVQLLLASVSISLMVLSQTGMLSVSSLIGLTFLGGIGAALMGPTWQAIVPEL 138
           L R ++ + +  + +++   L      G   V++LIG T + GI +A    +    V  +
Sbjct: 85  LKRSQYFLLIGAIFSAIGYVLCNGWVAGQ--VTALIGGTLIVGIASAYELTSRLKYVGLI 142

Query: 139 VKREDVKSAVALNSLGINIARSIGPAAGGLLLAAFGAGITYGADVASYIVVIAA--LVWW 196
           V    +   +A  S+  N+A+ IGP  GG  L           D  SY+V IA   LV  
Sbjct: 143 VPEATLAGYLAQFSVIFNVAKLIGPPVGGFALTFLHPSWVLSLDALSYLVPIAVVNLVMQ 202

Query: 197 PRAKNANDALQENFFGAFRAGLRYTRSSTPLHVVLLRAAIFFAFASAVW----ALLPLVA 252
           PR+  A +  Q          L  T++   +   L    +F   AS +     A++P++A
Sbjct: 203 PRSLTAAEQPQHR--------LTMTQAWQGITPQLRSITLFAGVASVIGFFHPAIVPVLA 254

Query: 253 RQLLGGDAGFYGILLGAVGAGAIGGALVMPKLRERL--SSDGLLLGAALITAAVMGVLAL 310
           +  +G D    G L  ++  G+I   L+  +  E +      +L+ A  +TA      AL
Sbjct: 255 KAYIGPDPLSLGWLTASIAIGSITAGLLQQRFSESVIGRPRQMLILATGVTAIAQVGFAL 314

Query: 311 APPKVVAIIVLLFLGGAWITALTTLNGTAQSVLPNWVRGR--GLAVYLTVFNGAMTAGSL 368
            P   +A+ +   +G      L   N   Q++ P   RGR  GL    T+  G ++  SL
Sbjct: 315 QPNAGIALFLAALIGFGTAGLLAGANIIGQALAPWEYRGRVAGLTQIATLGGGGVS--SL 372

Query: 369 GWGAVGEAVGIQSTL-IIGAIGLLIA 393
             G +   +G+   + ++G  GLL A
Sbjct: 373 LAGGLIAQLGLPLAMGLLGVAGLLAA 398