Pairwise Alignments

Query, 304 a.a., LysR family transcriptional regulator from Sinorhizobium meliloti 1021

Subject, 298 a.a., transcriptional regulator, LysR family (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  111 bits (277), Expect = 2e-29
 Identities = 92/294 (31%), Positives = 139/294 (47%), Gaps = 16/294 (5%)

Query: 8   TLDQLRVFIAVVETGSFAAAARKLNRATSVISYTIANLEAQLGVTLFDRLSTKKPQLTLE 67
           TL+QL +F  V   GS  AA+ KL++    IS +I  LE+QL V LFDR   +   LT E
Sbjct: 2   TLEQLLMFNTVALAGSLKAASDKLHKTQPAISQSIKQLESQLDVVLFDRQGYRL-ALTQE 60

Query: 68  GRTVLAEARSVSNGIDNLRAKVKSMLRGIEPEVHLALDVMLPASRVMDALKAFRKEFPSV 127
           GR +L  A+ V N    +R   K +  G E  + LA +     +R++  L+  + EFP  
Sbjct: 61  GRKLLQYAQRVLNEAQEMRQVAKHLAIGNEASITLAFEASFNLARILPMLERTQLEFPHT 120

Query: 128 SLRLYVEALGAVTQIVLNRTATVGISGPLDVDVLGLERIGVGFV---QLVPVAAPD--HP 182
            + L  E L    + +    A + IS    ++ +      +GF+    L+ VA+P     
Sbjct: 121 QIILKQEYLTGALEALNQGKADIAISAG-GIESMRSNHFELGFLFSGSLLDVASPRLLSR 179

Query: 183 LAGGSHAPGAARSHIQLVLTDRSPLTQGHEFAV-VGTHTWRLADLGAKHMLLKEGIGWGN 241
               SH       + Q+V+ D    T   EF V  G   W + D   K ML++ G+GWG 
Sbjct: 180 YPSLSHVKELVNEY-QIVIQDTGTGTANIEFGVQAGQRRWYVNDFYTKKMLIQSGMGWGK 238

Query: 242 MPEPMVRDDLADGRLVQLDLPDCKGGPYRLQAIY----RTDTPPGPAGRFLIEH 291
           +P  MV + LA+G L  L+L + +     +Q  Y    R  +P GP  + L E+
Sbjct: 239 LPYYMVEEALANGSLHPLELKERQN---LIQLDYYVMRRPQSPLGPVAQALWEN 289