Pairwise Alignments

Query, 420 a.a., hypothetical protein from Sinorhizobium meliloti 1021

Subject, 250 a.a., carboxymuconolactone decarboxylase family protein from Methanococcus maripaludis S2

 Score = 69.3 bits (168), Expect = 1e-16
 Identities = 37/133 (27%), Positives = 68/133 (51%)

Query: 6   IEQQLENLASPGDRQKHLRGLAVLKQIGGENFGGPVSQLASFSEDLARFTIQYPYGDVLS 65
           ++  LE  ++     +H +GL V K I GE               + ++     +GD  +
Sbjct: 118 VKLPLEGQSTTTPENRHEKGLEVQKSIFGEIIDKMYESSPKNQIHIQKYLSANCFGDYYT 177

Query: 66  RDGLDLRTRQILTAATLLAHGSAQSQLSFHLYGLLNAGGTRADVVDLLFISAGLLGFPTA 125
           R GLD++TR++LT   +LA G  +SQL  H+ G LN G  +  ++D +  +   +G+P  
Sbjct: 178 RTGLDIKTRELLTFCIILALGGCESQLKGHIVGNLNVGNDKKVLLDAVTQTLPYVGYPRT 237

Query: 126 INAVPIVRDILAD 138
           +NA+  + +I+ +
Sbjct: 238 LNAIACLNEIIPE 250



 Score = 58.9 bits (141), Expect = 2e-13
 Identities = 48/191 (25%), Positives = 82/191 (42%), Gaps = 13/191 (6%)

Query: 211 ASFDAHIVSALAAGATDSDIVEMVIQLSVYSGFPAALNAAGRARNVLAAPERPQASTQKG 270
           + +   +  AL  G T  ++ E+V Q   Y G   A +       +L +  R      +G
Sbjct: 67  SEYKVMLKGALNVGVTPIEVKEIVYQSVPYVGIAKAYDFINATNEILES--RGVKLPLEG 124

Query: 271 VDTTKDDEKRFMRGVATLAETSGGSGADVVDSFKDVAPG----LGRLIVAHCYGDIFCRP 326
             TT   E R  +G+       G    +++D   + +P     + + + A+C+GD + R 
Sbjct: 125 QSTTTP-ENRHEKGLEVQKSIFG----EIIDKMYESSPKNQIHIQKYLSANCFGDYYTRT 179

Query: 327 ALDPKVRELGAISALAAQGTVAAEKPLGVHIDAALNLGATPEEIVETLFNIIPYAGYPLI 386
            LD K REL     + A G    E  L  HI   LN+G   + +++ +   +PY GYP  
Sbjct: 180 GLDIKTRELLTFCIILALG--GCESQLKGHIVGNLNVGNDKKVLLDAVTQTLPYVGYPRT 237

Query: 387 EKALLIAHDRI 397
             A+   ++ I
Sbjct: 238 LNAIACLNEII 248



 Score = 47.4 bits (111), Expect = 5e-10
 Identities = 51/234 (21%), Positives = 89/234 (38%), Gaps = 25/234 (10%)

Query: 35  ENFGGPVSQLASFSEDLARFTIQYPYGDVLSRDGLDLRTRQILTAATLLAHGSAQSQLSF 94
           E F    S L     +L      + + +V+    LD +TR ++    L+      S+   
Sbjct: 13  ELFPDHKSALKITDPELVEIFDNFAFDEVIQHGDLDTKTRLMVILGALIG-SQTLSEYKV 71

Query: 95  HLYGLLNAGGTRADVVDLLFISAGLLGFPTAINAVPIVRDILADRDETKNVAGAQTSPAV 154
            L G LN G T  +V ++++ S   +G   A + +    +IL  R     + G  T+   
Sbjct: 72  MLKGALNVGVTPIEVKEIVYQSVPYVGIAKAYDFINATNEILESRGVKLPLEGQSTTT-- 129

Query: 155 PDMPSDRFA------------VLDRIAPDFVNWREHT---LGEEIFGAVH----LEPRLA 195
              P +R              ++D++       + H    L    FG  +    L+ +  
Sbjct: 130 ---PENRHEKGLEVQKSIFGEIIDKMYESSPKNQIHIQKYLSANCFGDYYTRTGLDIKTR 186

Query: 196 HLASAAMLAARGKVGASFDAHIVSALAAGATDSDIVEMVIQLSVYSGFPAALNA 249
            L +  ++ A G   +    HIV  L  G     +++ V Q   Y G+P  LNA
Sbjct: 187 ELLTFCIILALGGCESQLKGHIVGNLNVGNDKKVLLDAVTQTLPYVGYPRTLNA 240



 Score = 38.5 bits (88), Expect = 2e-07
 Identities = 24/85 (28%), Positives = 39/85 (45%), Gaps = 3/85 (3%)

Query: 298 DVVDSFKDVAPGLGRLIVAHCYGDIFCRPALDPKVRELGAISALAAQGTVAAEKPLGVHI 357
           D   + K   P L  +     + ++     LD K R +  + AL    T++  K   V +
Sbjct: 17  DHKSALKITDPELVEIFDNFAFDEVIQHGDLDTKTRLMVILGALIGSQTLSEYK---VML 73

Query: 358 DAALNLGATPEEIVETLFNIIPYAG 382
             ALN+G TP E+ E ++  +PY G
Sbjct: 74  KGALNVGVTPIEVKEIVYQSVPYVG 98