Pairwise Alignments

Query, 420 a.a., hypothetical protein from Sinorhizobium meliloti 1021

Subject, 128 a.a., carboxymuconolactone decarboxylase family protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score = 98.6 bits (244), Expect = 9e-26
 Identities = 45/121 (37%), Positives = 77/121 (63%)

Query: 20  QKHLRGLAVLKQIGGENFGGPVSQLASFSEDLARFTIQYPYGDVLSRDGLDLRTRQILTA 79
           Q++++GLA L +I GE     +  LA    DL ++ I+YP+GD+  R+GLDL+TR+++T 
Sbjct: 4   QRYVQGLAKLTEIDGEAGEKVIRSLADICPDLGKYIIEYPFGDIYQREGLDLKTRELVTV 63

Query: 80  ATLLAHGSAQSQLSFHLYGLLNAGGTRADVVDLLFISAGLLGFPTAINAVPIVRDILADR 139
           A L A G  Q QL+ H+ G LN G T  ++V+++   +   GFP A+N + + + + ++R
Sbjct: 64  AALTALGHCQPQLNVHINGALNVGCTPKEIVEVILQMSVYAGFPAALNGMFVAKTVFSER 123

Query: 140 D 140
           +
Sbjct: 124 E 124



 Score = 94.7 bits (234), Expect = 1e-24
 Identities = 49/127 (38%), Positives = 78/127 (61%), Gaps = 5/127 (3%)

Query: 279 KRFMRGVATLAETSGGSGADVVDSFKDVAPGLGRLIVAHCYGDIFCRPALDPKVRELGAI 338
           +R+++G+A L E  G +G  V+ S  D+ P LG+ I+ + +GDI+ R  LD K REL  +
Sbjct: 4   QRYVQGLAKLTEIDGEAGEKVIRSLADICPDLGKYIIEYPFGDIYQREGLDLKTRELVTV 63

Query: 339 SALAAQGTVAAEKPLGVHIDAALNLGATPEEIVETLFNIIPYAGYPLIEKALLIAHDRIS 398
           +AL A G    +  L VHI+ ALN+G TP+EIVE +  +  YAG+P     + +A    +
Sbjct: 64  AALTALG--HCQPQLNVHINGALNVGCTPKEIVEVILQMSVYAGFPAALNGMFVAK---T 118

Query: 399 LFDEKQV 405
           +F E+++
Sbjct: 119 VFSEREL 125



 Score = 56.2 bits (134), Expect = 5e-13
 Identities = 35/95 (36%), Positives = 51/95 (53%), Gaps = 2/95 (2%)

Query: 168 IAPDFVNWR-EHTLGEEIFGAVHLEPRLAHLASAAMLAARGKVGASFDAHIVSALAAGAT 226
           I PD   +  E+  G+ I+    L+ +   L + A L A G      + HI  AL  G T
Sbjct: 31  ICPDLGKYIIEYPFGD-IYQREGLDLKTRELVTVAALTALGHCQPQLNVHINGALNVGCT 89

Query: 227 DSDIVEMVIQLSVYSGFPAALNAAGRARNVLAAPE 261
             +IVE+++Q+SVY+GFPAALN    A+ V +  E
Sbjct: 90  PKEIVEVILQMSVYAGFPAALNGMFVAKTVFSERE 124