Pairwise Alignments

Query, 508 a.a., ABC transporter substrate-binding protein from Sinorhizobium meliloti 1021

Subject, 518 a.a., nickel/dipeptide/oligopeptide ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

 Score =  156 bits (395), Expect = 1e-42
 Identities = 141/496 (28%), Positives = 225/496 (45%), Gaps = 55/496 (11%)

Query: 10  ALAVTMAACSFGATVAFAQEGCVRVLGYESDGEKQTMDPAALIGTDSVYHIRAVYEPLVD 69
           ALA+  A  SFGA  A         + Y++D    +MDP   +   ++     V++PL+ 
Sbjct: 9   ALALIAAGLSFGAMAADI------TVAYDAD--PVSMDPHEQLSGGTLQLSHMVFDPLIR 60

Query: 70  RSNTMQPVPALAESWESNADATEWTFHLRKGVKFHDGSDFDAKDVVYSYRRLLDPAVSPG 129
            +  M+  P LAESW+   D     F LRKGVKFH G+DF A DVV+++ RL + A   G
Sbjct: 61  FTQKMEFEPRLAESWQ-RVDNETMRFTLRKGVKFHSGNDFTADDVVWTFNRLKESADFKG 119

Query: 130 GFSTLAFLDADGITAIDDHTVRFKV--KEPVVE------LPMLIATKYALMVPEGAKSED 181
            F  L       +T +DD+T+  K     P++E       PM  +  Y     +G    +
Sbjct: 120 IFEPLV-----SLTKVDDYTIEIKTAGTYPLIENVATYIFPM-DSKFYTGTTADGKNKAE 173

Query: 182 LRVKGN--------GTGPFMQETFTINGAVRVMRRNPTYW-RAGLPKSECLEITTSLEPT 232
           +   GN        GTGPF   T    G     +RNP YW +A     + L +    E  
Sbjct: 174 IVKHGNSFASENISGTGPF-TVTAREQGVKLEFQRNPNYWDKASKGNVDKLTLAVIKEDA 232

Query: 233 SRLSALLSGTVDLSLTVDPASLITLKDNPAVELAATPGATSLYIAV-WTDTPPFDSVKVR 291
           +R++ALLSG VD+   V P     +KD   V+L   PG   +   +     P    V+VR
Sbjct: 233 TRVAALLSGGVDMIAPVSPNDYQRIKDAKGVDLFTMPGTRVITFQMNQNSNPALKDVRVR 292

Query: 292 EAMKLVMDRQKILDTVLLGYGEVGADTPIPPSSPFGLGTPAKTA----DIEKATALLAEA 347
           +A+   ++ + I+D V+      GA T     SP G     +      D+ KA  L+ EA
Sbjct: 293 QAIVYAINNEGIVDKVM-----KGAATTAAQQSPVGYAGYNENLKPRFDLNKAKELMKEA 347

Query: 348 GHPDGIDFDLYT-SDSYPGMMLLAQVYAQMAAPAGIRVNVITSPAEGYWDTIWLKKPAVI 406
           G+  G +  +   ++ Y     +AQ  + M +  GI+V++ T P   YW   + K  A +
Sbjct: 348 GYEKGFNLTMIAPNNRYVNDEKIAQAASAMLSKIGIKVDLKTMPKAQYWPE-FDKCAADM 406

Query: 407 SYTSARPP-------AEALTLSLNS---KSEWNETHWTRDDFDALVVKAGQTADEKQRND 456
                 P         E LT++ +S   K ++N  +++  + D LV  A +  D ++R+ 
Sbjct: 407 LMIGWHPDTEDSANFTEFLTMTRDSNTGKGQYNCGYYSNAEVDKLVNAANEETDLEKRST 466

Query: 457 LYRDAQRIVADEGGMI 472
           + +  + I+ +E   +
Sbjct: 467 MLKKVEEILYNEAAFV 482