Pairwise Alignments

Query, 295 a.a., ABC transporter permease from Sinorhizobium meliloti 1021

Subject, 286 a.a., Dipeptide transport system permease protein dppC from Pseudomonas fluorescens FW300-N2E2

 Score =  157 bits (397), Expect = 3e-43
 Identities = 95/270 (35%), Positives = 139/270 (51%), Gaps = 4/270 (1%)

Query: 21  RATPGPFKVGAVILVAHALFAILGVFWTPYGFAEMGAGLPLSGASWQHPMGLDQIGRDVF 80
           R TP    +GA + V   L AI G +  P+   E+ +       S  +P+G D +GRD+ 
Sbjct: 17  RKTPWLGLIGAAMCVIWLLVAIFGPWLAPHPVGEVVSDNVFDNLSATYPLGTDYLGRDML 76

Query: 81  SRFMHGAHIVLMLSFAGTMLGMVAGTTLGLLSGYIGGWFDEVTQRIVEAMISIPFLALAL 140
           SR + GA   + L+    +L    GT+  LLS     W DE+  R+++A ISIP   LAL
Sbjct: 77  SRILVGARFTVGLALVAAVLASGLGTSCALLSVVSPKWLDELISRLMDAFISIPSKMLAL 136

Query: 141 VMIIAAGPALAGKPVLIVFVVGLVYAPRIVRIARAAAMDIATREYVAVAELRGEGTWSIV 200
           +M+ A G ++     L++    L + P   RIAR+ A++I   EYV VA  RGE    I 
Sbjct: 137 IMVSAFGSSVT----LLICTAVLSFMPGAFRIARSMAVNIEALEYVQVARTRGERRLYIA 192

Query: 201 FREILPNAANVLLVEFSLRLSYAPILIGALGFLGFGIRPPTPEWGLMISENRNLLIASPV 260
             EILPN  N +L +  LR  +  +L+  + FLG G++PP  + G ++ EN   L     
Sbjct: 193 CVEILPNMLNPVLTDLGLRFGFIVLLLSGMSFLGLGVQPPDADLGSLVRENIGGLNQGAP 252

Query: 261 TVFGPGLGLASLVIGFNLFTDGLSRMLGQR 290
            +  P L + +L IG NLF D LS    +R
Sbjct: 253 AIVIPALAIGTLTIGVNLFIDRLSSRRNRR 282