Pairwise Alignments

Query, 295 a.a., ABC transporter permease from Sinorhizobium meliloti 1021

Subject, 325 a.a., Binding-protein-dependent transport systems inner membrane component (NCBI) from Rhodospirillum rubrum S1H

 Score =  172 bits (436), Expect = 9e-48
 Identities = 104/286 (36%), Positives = 149/286 (52%), Gaps = 9/286 (3%)

Query: 8   PARRFSRFNAERWRATPGPFKVGAVILVAHALFAILGVFWTPYGFAEMGAGLP---LSGA 64
           P   F  + +E   A  G   +  +++VA  LFA       PY      A +P   L G 
Sbjct: 43  PLAEFWHYFSENKGAVAGLIFIVVIVIVA--LFAPQVAPHHPYEMNVPMAKMPPAWLEGG 100

Query: 65  SWQHPMGLDQIGRDVFSRFMHGAHIVLMLSFAGTMLGMVAGTTLGLLSGYIGGWFDEVTQ 124
            W + +G D +GRD+ SR + GA + LM+      L +VAG  LGLL+G++ GW D V  
Sbjct: 101 QWSYLLGTDALGRDILSRIIFGARLSLMVGAVVVTLSLVAGVGLGLLAGFLRGWVDIVIM 160

Query: 125 RIVEAMISIPFLALALVMIIAAGPALAGKPVLIVFVVGLVYAPRIVRIARAAAMDIATRE 184
           R+++ ++S+P L LA+ ++   GP L      I  VV     P   R+ RAA M  AT++
Sbjct: 161 RLMDIILSVPSLLLAIAIVAILGPGLENAMAAIAVVV----LPHYTRLTRAAVMTEATKD 216

Query: 185 YVAVAELRGEGTWSIVFREILPNAANVLLVEFSLRLSYAPILIGALGFLGFGIRPPTPEW 244
           YV  + + G     ++ + ILPN    L+V+ +L  S A +   ALGFLG G RPP PEW
Sbjct: 217 YVTASRVAGASKGRLMVKTILPNTLAPLIVQATLGFSTAILDAAALGFLGLGARPPRPEW 276

Query: 245 GLMISENRNLLIASPVTVFGPGLGLASLVIGFNLFTDGLSRMLGQR 290
           G M+SE R  +++    V  PGL +   V+ FNL  DGL   L  R
Sbjct: 277 GTMLSEAREFVLSHWWIVTFPGLAILFTVLAFNLMGDGLRDALDPR 322