Pairwise Alignments

Query, 604 a.a., ABC transporter ATP-binding protein from Sinorhizobium meliloti 1021

Subject, 553 a.a., ABC-type uncharacterized transport system, duplicated ATPase component from Pseudomonas stutzeri RCH2

 Score =  227 bits (578), Expect = 1e-63
 Identities = 129/263 (49%), Positives = 174/263 (66%), Gaps = 9/263 (3%)

Query: 2   KNLIEVRNLNIAYGGPSGWTNVVQDVSFEIAPGEAFGLVGESGCGKSTVAY---RLLGYG 58
           +NL+EVR+L + +        VV+ V+F+I  GE   LVGESG GKS  A+   RLL Y 
Sbjct: 8   ENLVEVRDLAVEFVTGEQVQRVVEGVTFDIRKGETLALVGESGSGKSVTAHSILRLLPYP 67

Query: 59  TINSLVQTGEVLFDGTDLLKLDAASLMRLRGNRIAFVPQNPTTSLSPGMRVGSQICEMIA 118
                   G++LF G DLLK D  ++ ++RGNRIA V Q P TSL+P   VG QI E++ 
Sbjct: 68  LARH--PQGQILFHGQDLLKADEKAMRKIRGNRIAMVFQEPMTSLNPLHTVGKQINEVLE 125

Query: 119 THKALPDGMTMERRIVELFTLVGLPDVGHR---YPHELSGGQQQRVTIAMAVACNPDLLV 175
            HK L  G     R +EL  LVG+P+   R   YPHELSGGQ+QRV IAMA+A  P+LL+
Sbjct: 126 IHKGLR-GKAATARTLELLELVGIPEPRKRIRAYPHELSGGQRQRVVIAMALANEPELLI 184

Query: 176 LDEPTTGLDVTTQRQIIQLLADLRSRIGMAMLYVTHDLALLAQIADRVGVMYAGQLVEVA 235
            DEPTT LDVT Q +I++LL +L++R+GMA+L ++HDL L+ +IA RV VM  G++VE A
Sbjct: 185 ADEPTTALDVTVQLKILELLKELQARLGMALLLISHDLNLVRRIAHRVCVMQRGRVVEQA 244

Query: 236 PCDKLLSAPAHPYSRGLIASIPT 258
            C+ L  AP HPY++ L+A+ P+
Sbjct: 245 LCEDLFRAPQHPYTQELLAAEPS 267



 Score =  165 bits (418), Expect = 4e-45
 Identities = 94/243 (38%), Positives = 142/243 (58%), Gaps = 8/243 (3%)

Query: 24  VQDVSFEIAPGEAFGLVGESGCGKSTVAYRLLGYGTINSLVQTGEVLFDGTDLLKLDAAS 83
           V  V+F +  G+  G+VGESG GKST     LG   +  L   GE+ F G  L  +    
Sbjct: 306 VDGVNFSLPKGQTLGIVGESGSGKST-----LGLAILRLLGSRGEIRFQGQHLQSMSQRQ 360

Query: 84  LMRLRGNRIAFVPQNPTTSLSPGMRVGSQICEMIATHKALPDGMTMERRIVELFTLVGL- 142
           +  LR  ++  V Q+P  SLSP M VG  + E +  H+ + +    E+ I+E    VGL 
Sbjct: 361 VRPLR-RQMQVVFQDPFGSLSPRMSVGQIVGEGLHIHR-MGNAKEQEQAIIEALVEVGLD 418

Query: 143 PDVGHRYPHELSGGQQQRVTIAMAVACNPDLLVLDEPTTGLDVTTQRQIIQLLADLRSRI 202
           P+  HRYPHE SGGQ+QR+ IA A+   P L++LDEPT+ LD T QRQ+++LL  L+++ 
Sbjct: 419 PETRHRYPHEFSGGQRQRIAIARALVLKPALILLDEPTSALDRTVQRQVVELLRSLQAKY 478

Query: 203 GMAMLYVTHDLALLAQIADRVGVMYAGQLVEVAPCDKLLSAPAHPYSRGLIASIPTNDGT 262
            +  L+++HDLA++  ++ ++ V+  GQ+VE      + +AP HPY++ L+ S     GT
Sbjct: 479 NLTYLFISHDLAVVRALSHQMMVVKQGQVVEQGAAADIFAAPQHPYTQQLLESAFMAPGT 538

Query: 263 DRQ 265
             Q
Sbjct: 539 AEQ 541



 Score = 55.8 bits (133), Expect = 5e-12
 Identities = 43/108 (39%), Positives = 59/108 (54%), Gaps = 6/108 (5%)

Query: 342 LLSVTELSLSYQ-QPGLFNRLLGRTSPAVVREINLNLAAGEVVALVGGSGSGKSTIARAI 400
           LL V +L + +  + GL  R +       V  +N +L  G+ + +VG SGSGKST+  AI
Sbjct: 279 LLEVDDLRVWFPIKKGLLRRTVDHIK--AVDGVNFSLPKGQTLGIVGESGSGKSTLGLAI 336

Query: 401 SARLPPRAGIIRLDGTALAPSLKDRSVEEL-RQIQYIFQNPDASLNPR 447
             RL    G IR  G  L  S+  R V  L RQ+Q +FQ+P  SL+PR
Sbjct: 337 -LRLLGSRGEIRFQGQHL-QSMSQRQVRPLRRQMQVVFQDPFGSLSPR 382



 Score = 47.4 bits (111), Expect = 2e-09
 Identities = 38/115 (33%), Positives = 60/115 (52%), Gaps = 16/115 (13%)

Query: 339 SESLLSVTELSLSYQQPGLFNRLLGRTSPAVVREINLNLAAGEVVALVGGSGSGKSTIAR 398
           +E+L+ V +L++ +        + G     VV  +  ++  GE +ALVG SGSGKS  A 
Sbjct: 7   AENLVEVRDLAVEF--------VTGEQVQRVVEGVTFDIRKGETLALVGESGSGKSVTAH 58

Query: 399 AISARLP-PRA----GIIRLDGTALAPSLKDRSVEELR--QIQYIFQNPDASLNP 446
           +I   LP P A    G I   G  L  +  ++++ ++R  +I  +FQ P  SLNP
Sbjct: 59  SILRLLPYPLARHPQGQILFHGQDLLKA-DEKAMRKIRGNRIAMVFQEPMTSLNP 112