Pairwise Alignments

Query, 604 a.a., ABC transporter ATP-binding protein from Sinorhizobium meliloti 1021

Subject, 571 a.a., ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

 Score =  222 bits (565), Expect = 4e-62
 Identities = 158/484 (32%), Positives = 238/484 (49%), Gaps = 73/484 (15%)

Query: 3   NLIEVRNLNIAYGGPSGWTNVVQDVSFEIAPGEAFGLVGESGCGKSTVAYRLLGYGTINS 62
           +L+EV+NL I Y    G    V+ ++ +I  GE  G+VGESG GKSTV   ++   +   
Sbjct: 2   SLLEVKNLRIEYPSRHGVHAAVKSLTLDIQRGEIVGVVGESGAGKSTVGNAVIDLLSPPG 61

Query: 63  LVQTGEVLFDGTDLLKLDAASLMRLRGNRIAFVPQNPTTSLSPGMRVGSQICEMIATHKA 122
            +  GEV  +G  +  L   ++  +RG++I F+ Q+P TSL+P   V  Q+ E I  +  
Sbjct: 62  TIAGGEVYLNGEKISGLSPQAMREVRGSKIGFIFQDPMTSLNPLFTVEHQLTETIHANMQ 121

Query: 123 LPDGMTMERRIVELFTLVGLPDVGHR---YPHELSGGQQQRVTIAMAVACNPDLLVLDEP 179
           +      +R +  L   VG+P   +R   YPH+ SGG +QRV IA+A+A  PDL++ DEP
Sbjct: 122 VSAEEAYQRAL-SLMKQVGIPQPENRLKQYPHQFSGGMRQRVVIAIALAGEPDLIIADEP 180

Query: 180 TTGLDVTTQRQIIQLLADLRSRIGMAMLYVTHDLALLAQIADRVGVMYAGQLVEVAPCDK 239
           TT LDV+ Q QI+ L+ +L  +  +  + VTHD+ +++ + DRV VMY G LVE  P  K
Sbjct: 181 TTALDVSIQDQILNLIRELCKKNNVGCMLVTHDMGVVSNVTDRVAVMYRGDLVEFGPTAK 240

Query: 240 LLSAPAHPYSRGLIASIPTNDGTDRQARSLRGMLRRDEMSTGCKFEPRCDFATGACRATP 299
           +L  P HPY+R LI+++P +   DR+                                  
Sbjct: 241 VLGTPEHPYTRSLISAVPRS---DRKLDRF------------------------------ 267

Query: 300 QLLELIEDARSVACM----RW-------REATAPLAPSVTAKAVARTAVRSESLLSVTEL 348
            L+  IE+A+ +  +     W       R+ T PL             V + +L  VT+ 
Sbjct: 268 PLVSYIEEAKELKPLDVKSHWLGQSQDHRKYTGPLLK-----------VENVNLRFVTKD 316

Query: 349 SLSYQQPGLFNRLLGRTSPAVVREINLNLAAGEVVALVGGSGSGKSTIARAISARLPPRA 408
           SL   +         R        ++  +  GE   LVG SGSGKSTIAR I+    P A
Sbjct: 317 SLFESR---------REYVQASNNVSFAVHEGETFGLVGESGSGKSTIARVIAGLYQPNA 367

Query: 409 GIIRLDGTALAPSLKDRSVEEL-RQIQYIFQNPDASLNPRGLRLFERTQELDDPCLYRNV 467
           G +  +G  L     +     L RQ+Q +FQNP  S+NPR +++F+   E   P  +  +
Sbjct: 368 GRVTFEGIDLTALKSEHERRPLRRQMQMVFQNPYTSMNPR-MKIFDIIAE---PIRFHKL 423

Query: 468 ERRE 471
            R E
Sbjct: 424 TRSE 427



 Score =  187 bits (476), Expect = 8e-52
 Identities = 108/266 (40%), Positives = 156/266 (58%), Gaps = 12/266 (4%)

Query: 4   LIEVRNLNIAYGGPSG-------WTNVVQDVSFEIAPGEAFGLVGESGCGKSTVAYRLLG 56
           L++V N+N+ +            +     +VSF +  GE FGLVGESG GKST+A  + G
Sbjct: 302 LLKVENVNLRFVTKDSLFESRREYVQASNNVSFAVHEGETFGLVGESGSGKSTIARVIAG 361

Query: 57  YGTINSLVQTGEVLFDGTDLLKLDAASLMRLRGNRIAFVPQNPTTSLSPGMRVGSQICEM 116
               N+    G V F+G DL  L +    R    ++  V QNP TS++P M++   I E 
Sbjct: 362 LYQPNA----GRVTFEGIDLTALKSEHERRPLRRQMQMVFQNPYTSMNPRMKIFDIIAEP 417

Query: 117 IATHKALPDGMTMERRIVELFTLVGLPDV-GHRYPHELSGGQQQRVTIAMAVACNPDLLV 175
           I  HK         + + +L   VGL  + G +YPHE SGGQ+QR++IA A+A  P LL+
Sbjct: 418 IRFHKLTRSESETRQIVNDLLEHVGLGKMAGLKYPHEFSGGQRQRISIARALATRPRLLI 477

Query: 176 LDEPTTGLDVTTQRQIIQLLADLRSRIGMAMLYVTHDLALLAQIADRVGVMYAGQLVEVA 235
            DEPT+ LDV+ Q QI+ LL DL+  + + ML+++HDL ++ Q+ DRVGVM  G L+EVA
Sbjct: 478 CDEPTSALDVSVQAQILNLLKDLQDELNLTMLFISHDLPVIRQMCDRVGVMQMGTLLEVA 537

Query: 236 PCDKLLSAPAHPYSRGLIASIPTNDG 261
           P ++L + P H YS+ LI+ +P   G
Sbjct: 538 PTEQLFTDPQHEYSKKLISLMPEFTG 563