Pairwise Alignments

Query, 131 a.a., hypothetical protein from Sinorhizobium meliloti 1021

Subject, 997 a.a., PAS domain S-box from Pseudomonas stutzeri RCH2

 Score = 48.1 bits (113), Expect = 3e-10
 Identities = 34/123 (27%), Positives = 66/123 (53%), Gaps = 5/123 (4%)

Query: 3   SVTILLAEDETLLLLDFEDALKEAGFMVLAVTSGKKAVEHLKAAESSIAGIVTDIRFAES 62
           ++T+L  +D+ L+L      L+ AG  VL   S  +A++ L+  +  +  ++TD      
Sbjct: 880 ALTLLAVDDDELVLFGTAGMLEAAGHRVLTARSAGEALDLLRTNQVDM--LITD-HAMPL 936

Query: 63  PSGWDVTRIAREIDPEMPVVYISGDSAPDWASQGVPKSIMIEKPFVMSQMIVAISQLLND 122
            SG  +  + RE  P++P++ +SG +    A+  +P    + KPF  ++++ A+ Q L+ 
Sbjct: 937 MSGAQLAAVVRETRPQLPILLVSGYAELPSATPALPLR-RLAKPFSQNELLDAVEQ-LSA 994

Query: 123 RRA 125
           RRA
Sbjct: 995 RRA 997