Pairwise Alignments

Query, 331 a.a., ABC transporter permease from Sinorhizobium meliloti 1021

Subject, 324 a.a., ribose transport system permease protein RbsC from Phaeobacter inhibens DSM 17395

 Score =  154 bits (389), Expect = 3e-42
 Identities = 103/299 (34%), Positives = 154/299 (51%), Gaps = 12/299 (4%)

Query: 26  IALAVIVLFGALVNPNFVSSANLINVITRSAFIAIIAVGATFVISSGGLDLSVGSMMAFV 85
           IA A+ ++   + NP F++  N  NV+  SA + ++A+G TFV+ SG LDLSVGSMM+F 
Sbjct: 20  IAFALFIIGFTIANPKFLTLDNFENVVRSSAILGVMALGVTFVVISGNLDLSVGSMMSFS 79

Query: 86  TGIMIMAMNHLAPAFGAWAIPMGAGVALLVGALCGLFNGLIVTVGRIEPFIVTLGTMGIF 145
           T +++   + L P     AIP    + L +GAL G   G +    ++   IVTLG +   
Sbjct: 80  TIVVLDLHDKLGPTL---AIPAMFAMTLCLGALIGFLVGYL----KLNSLIVTLGMLSAI 132

Query: 146 RAFITFMTDGGSLPIDRSLREAYRPVYFGSFFGIPYPVLITFVVVMAGAFLLYKTKYGRR 205
                  + G ++ I       +     G+  GI  P+LI   +      +L KT +GR+
Sbjct: 133 HGLTLTYSGGKNMDIADKEGTWFAIFGQGNILGIQTPILIFIALAALLGIILAKTPFGRK 192

Query: 206 LKSAGSNVEVARFSGVNVAGVRTGAYVIQGFCVAVAAICYVPRLGAATPTTGQLWELQVI 265
           + + G N   A FSG+  A V    Y++   CVA A +    R   +  T GQ  EL+V+
Sbjct: 193 VYAVGGNGTAATFSGIRRARVVFLCYIMSALCVATAGLIQASRSMGSQNTVGQGLELEVL 252

Query: 266 TAVVIGGTLLRGGRGRIGGTVAGALILEVIANVMVL--SDLVSEYLVAAVQGAIIIIAM 322
            AV++GG  L GG G I  TV G LIL  I N ++L   D   +Y+V  +   III+A+
Sbjct: 253 AAVILGGASLLGGSGTIFKTVIGVLILGFIQNGLLLVGLDFSVQYVVTWI---IIILAV 308