Pairwise Alignments

Query, 530 a.a., ABC transporter ATP-binding protein from Sinorhizobium meliloti 1021

Subject, 500 a.a., ribose import ATP-binding protein RbsA from Vibrio cholerae E7946 ATCC 55056

 Score =  357 bits (917), Expect = e-103
 Identities = 203/492 (41%), Positives = 305/492 (61%), Gaps = 7/492 (1%)

Query: 19  AALAAEGLGKAYGPITVLSDVTLEVHAGEVHAIIGENGAGKSTLMKLLSGHVVPTAGHLL 78
           A LA   + KA+  +  L   +L V+ G V A++GENGAGKSTLMK+L+G     AG + 
Sbjct: 4   AILALSQIEKAFPGVKALDKASLNVYPGRVMALMGENGAGKSTLMKVLTGIYSKDAGSIE 63

Query: 79  LEGKSVEFRNAVEAENAGIVLVHQEILLASDLTVAENLYLGREVGR--GLLVNDKAMNSR 136
            +G+ V F+   +++ AGI ++HQE+ L   LT+AEN++LGRE+    G ++ D+ M+ +
Sbjct: 64  YQGQPVSFKGPRDSQLAGISIIHQELNLIPQLTIAENIFLGREMTSPFGRILWDE-MHRK 122

Query: 137 AAELLARVGSAARPRDRVGELPLAQRQLVQIARALLDERKVIIFDEPTAVLANDEVAALL 196
           A +LLAR+      +  +GEL L ++Q+V+IA+AL  E KVII DEPT  L + E  +L 
Sbjct: 123 ADQLLARLNVKHSAKTLLGELSLGEQQMVEIAKALSFESKVIIMDEPTDALTDTETESLF 182

Query: 197 DIVRSLRDHGVAVLYISHRLDEVQALADRITVLRDGRMIGTWPAAGLGQREMAELMVGRE 256
           +++  LR+ G  ++YISHRL E+  + D ITVLRDG+ IG        +  + E+MVGR+
Sbjct: 183 NVINELREQGCGIVYISHRLKEIFEICDDITVLRDGKFIGECRVCDTNEDGLIEMMVGRK 242

Query: 257 LDMLYPHKRSATTAAPI-LSVTNLAIDHGSQTVSFSVSPGEVLGIGGMVGAGRTELIEGL 315
           L+  YP  R A     I L V  L    G   VSF++  GE+LG+ G++GAGRTEL++ +
Sbjct: 243 LEEQYP--RIAAQQGDISLEVIGLT-GSGVHDVSFTLKKGEILGVSGLMGAGRTELMKVI 299

Query: 316 MGLRPSEAESIVLNGREIGSRSVRTLMDAGLVYLTEDRKGKGLLLEEKLGPNLTLQALDT 375
            G  PSE   I LNGR +   S +  +  G+ Y++EDRKG GL+L   +  N++L ALD 
Sbjct: 300 YGALPSERGVINLNGRTVNPVSPQDGLANGIAYISEDRKGDGLVLGLSVKENMSLCALDQ 359

Query: 376 INPGVFLDKQGELSRLRKAVADYDIRVRSMRLEASQLSGGNQQKLLLAKVMMADPSVIII 435
           ++ GV +    E+  +   +  ++I+  S       LSGGNQQK+ +AK +M  P V+I+
Sbjct: 360 LSKGVQIRHADEVIAVDDFIRLFNIKTPSREQIIGNLSGGNQQKVAIAKGLMTKPKVLIL 419

Query: 436 DEPTRGIDIGNKSQIYDFIDGMVRAGKACIVISSEMPELVGLADRVLVMRAGRIVAELRG 495
           DEPTRG+D+G K +IY  I+     G + I++SSEMPE++G++DR+LVM  GRI  E   
Sbjct: 420 DEPTRGVDVGAKKEIYQLINQFKAEGMSIILVSSEMPEVLGMSDRILVMHEGRISGEFMA 479

Query: 496 DEINEENVVYAA 507
            E ++E ++  A
Sbjct: 480 SEADQEKLMACA 491



 Score = 80.1 bits (196), Expect = 2e-19
 Identities = 56/224 (25%), Positives = 110/224 (49%), Gaps = 6/224 (2%)

Query: 38  DVTLEVHAGEVHAIIGENGAGKSTLMKLLSGHVVPTAGHLLLEGKSVEFRNAVEAENAGI 97
           DV+  +  GE+  + G  GAG++ LMK++ G +    G + L G++V   +  +    GI
Sbjct: 271 DVSFTLKKGEILGVSGLMGAGRTELMKVIYGALPSERGVINLNGRTVNPVSPQDGLANGI 330

Query: 98  VLVHQEIL---LASDLTVAENLYLGR--EVGRGLLVNDKAMNSRAAELLARVGSAARPRD 152
             + ++     L   L+V EN+ L    ++ +G+ +          + +         R+
Sbjct: 331 AYISEDRKGDGLVLGLSVKENMSLCALDQLSKGVQIRHADEVIAVDDFIRLFNIKTPSRE 390

Query: 153 RV-GELPLAQRQLVQIARALLDERKVIIFDEPTAVLANDEVAALLDIVRSLRDHGVAVLY 211
           ++ G L    +Q V IA+ L+ + KV+I DEPT  +       +  ++   +  G++++ 
Sbjct: 391 QIIGNLSGGNQQKVAIAKGLMTKPKVLILDEPTRGVDVGAKKEIYQLINQFKAEGMSIIL 450

Query: 212 ISHRLDEVQALADRITVLRDGRMIGTWPAAGLGQREMAELMVGR 255
           +S  + EV  ++DRI V+ +GR+ G + A+   Q ++    VGR
Sbjct: 451 VSSEMPEVLGMSDRILVMHEGRISGEFMASEADQEKLMACAVGR 494