Pairwise Alignments

Query, 334 a.a., TRAP-type periplasmic solute-binding protein from Sinorhizobium meliloti 1021

Subject, 330 a.a., tripartite ATP-independent periplasmic transporter solute receptor, DctP family from Pseudomonas stutzeri RCH2

 Score =  122 bits (307), Expect = 1e-32
 Identities = 88/317 (27%), Positives = 152/317 (47%), Gaps = 14/317 (4%)

Query: 15  LSAAAPAFAEFNDRNIRVSNGINEDHPVGNGIKAMQACLDQKSGGKLKLTAFWGGALGGD 74
           L A A A A+     I+ S+ + +D P G G    +   +++  G++++  +    L GD
Sbjct: 11  LLALASACAQAEPIVIKFSHVVADDTPKGKGALMFKRLAEERLAGQVRVEVYPNSTLFGD 70

Query: 75  LQATQALRSGVQEAVVTSSSPLVGIIPALGVFDLPFLFANAQEAYTVLDGDFGDMMNEKL 134
               +ALR+   + +  S +        L VFDLPFLF + +          G  +   +
Sbjct: 71  ATELEALRNDEVQLLAPSLAKFEQYTKQLQVFDLPFLFDDIEAVNRFQKRAKGKQLLRSM 130

Query: 135 EAAGLVNLAYWENGFRNLSNSVRPVTKWEDFEGMKVRVMQNNIFLDTFQNLGANATPMAF 194
           E   +  LAYW NG + LS + R + +  D  G+  R+  + +    F  +GA+   + F
Sbjct: 131 EDKNITGLAYWHNGMKQLS-ATRMLRQPSDASGLSFRIQPSAVLEAQFGTVGASTQKIPF 189

Query: 195 GEVFSALETKAIDAQENPYVTIDTSKFFEVQKYVTETNHAYTPFLFLFSKPIFDSYTP-- 252
            +V+ AL    +   ENP+  I + K   VQ Y+ ET+H    ++ + S   F    P  
Sbjct: 190 ADVYDALRAGTVQGAENPWSNIYSKKMHTVQPYIIETDHGVLDYM-VVSNTRFWMGMPHK 248

Query: 253 ---EEQAALRECA-VVGRDEERKVIQDLNKKSLEKIKEAGL-EVNTLSAEEQARIREKSM 307
              E +A L E + +V R+ +     +LN+   E+I++AG  E+  LS EE+ R RE   
Sbjct: 249 IRFELEAILDEVSFMVNREAD-----ELNRADRERIRQAGTSEIVALSPEERERWREAMR 303

Query: 308 VVYEKHKAEIGAEVVDA 324
            V+++ +  IGA+++ A
Sbjct: 304 PVWQQFEPVIGADIIKA 320