Pairwise Alignments

Query, 177 a.a., TRAP-type small permease component from Sinorhizobium meliloti 1021

Subject, 376 a.a., fusion of gluconokinase (EC 2.7.1.12) and the small permease component of the D-gluconate TRAP transporter (from data) from Pseudomonas stutzeri RCH2

 Score = 77.8 bits (190), Expect = 2e-19
 Identities = 51/165 (30%), Positives = 85/165 (51%), Gaps = 6/165 (3%)

Query: 8   FYKLLELLLIVLLAGMAVMVFLNVVLRYGFNSGINVSDEMSRYFFVWLTFIGAVVTFREN 67
           F +L + L+  L+A M ++VF +VVLRY F +G   ++E+SR  FVWL F+G   + R  
Sbjct: 217 FDRLTDWLMAALMAFMVIVVFSSVVLRYAFGTGWTGAEELSRLAFVWLVFVGVASSMRRG 276

Query: 68  SHVGVETLVSLFGRKGRIICMILSNIVVIAVSAIFFWGTWKQSPINASMAAPVTGISMLW 127
             +    L   F R  R +   LS ++V A S +  WG W Q     ++ +PV G  +  
Sbjct: 277 ELMSFSMLRDRFPRLFRRVVDSLSWLLVAAASCLAAWGGWNQMQFGWTINSPVVGYPL-- 334

Query: 128 VYGIGYF-TGAGVVLIALERLVRLLTGRVTEEEIAAFAGENMTLE 171
             G+      A +V +A+  L++L+      ++ +A A  N+T +
Sbjct: 335 --GLAMLPVAASMVALAVLALLQLV-NVWRRDQPSATAAANVTAD 376