Pairwise Alignments

Query, 177 a.a., TRAP-type small permease component from Sinorhizobium meliloti 1021

Subject, 225 a.a., TRAP transporter for fumarate, succinate, L-malate, and 2-oxogulatarate, small permease component (from data) from Phaeobacter inhibens DSM 17395

 Score = 55.1 bits (131), Expect = 8e-13
 Identities = 34/123 (27%), Positives = 62/123 (50%), Gaps = 11/123 (8%)

Query: 11  LLELLLIVLLAGMAVMVFLNVVLRYGFNSGINVSDEMSRYFFVWLTFIGAVVTFRENSHV 70
           L E L+ +LL  M ++ F NVV R+ FNS I  + E++ + F WL  +GA    + ++H+
Sbjct: 15  LEETLIALLLGLMTLITFANVVARFVFNSNILWALELTVFLFAWLVLLGASYAVKVHAHL 74

Query: 71  GVETLVSLFGRKGRII--------CMILSNIVVIAVSAIFFWGTWKQSPINASMAAPVTG 122
           GV+ ++++     R +        C++ S  +++   A  +W  +   P  +    P TG
Sbjct: 75  GVDAILNMVSPGARRVIGLISVGCCLVFS--LLLLKGAYDYWAVFADLPPTSGRWFP-TG 131

Query: 123 ISM 125
             M
Sbjct: 132 FDM 134