Pairwise Alignments

Query, 316 a.a., ABC transporter substrate-binding protein from Sinorhizobium meliloti 1021

Subject, 336 a.a., sugar-binding protein, putative (NCBI ptt file) from Shewanella oneidensis MR-1

 Score = 52.0 bits (123), Expect = 2e-11
 Identities = 39/114 (34%), Positives = 58/114 (50%), Gaps = 6/114 (5%)

Query: 42  FFNPVVKGAQDAAAQF-GVDLDVQYANNDPVR-QNDLIESATASGVDGIAVAISSSD-AF 98
           FF+    G  DAAAQ  GV+   +      VR Q+ +I      GVDGIAVA++ S    
Sbjct: 36  FFDQSKNGCIDAAAQIEGVECIYRGPEISSVRLQDQVINQLIDEGVDGIAVAVTQSKYLV 95

Query: 99  DESICAAVKAGIIVIGFNND---DLDGAKGNCRQAYVGMDELASGYELGNRMIK 149
           + S+  A + GI ++ +++D    ++G   N R AY+G D    G  LG  + K
Sbjct: 96  ENSLKRAKEVGIPIVTYDSDFDASINGDPKNFRLAYIGTDNFELGKSLGEELKK 149