Pairwise Alignments

Query, 316 a.a., ABC transporter substrate-binding protein from Sinorhizobium meliloti 1021

Subject, 346 a.a., periplasmic binding protein/LacI transcriptional regulator (RefSeq) from Dinoroseobacter shibae DFL-12

 Score = 58.2 bits (139), Expect = 3e-13
 Identities = 64/227 (28%), Positives = 93/227 (40%), Gaps = 18/227 (7%)

Query: 1   MKLTRLRTAALAAGLATLLTSTA---LAADVKATMIIYLDPSVQFFNPVVKGAQDAAAQF 57
           M      + AL AG AT   + A      +V   ++ YL     FF   + G +  AA  
Sbjct: 7   MAFASAASLALGAGAATAQEAPAPLDTPEEVTIALVRYLSTG-DFFQAYLSGVETQAAAL 65

Query: 58  GVDLDVQYANNDPVRQNDLIESATASGVDGIAVAISSSDAFDESICAAVKAGIIVIGFNN 117
           GV+L V  +  D   Q D+++ A A GVDGI +    +++  E+   AV AGI V+ F+ 
Sbjct: 66  GVNLRVFDSRQDAALQADMVDQAIALGVDGIIIQHGLTESMREAAQRAVDAGIKVVAFDV 125

Query: 118 DDLDGAKGNCRQAYVGMDELASGYELGNRMIKEFGLKSGD-VVFNPREIPEASFAVARGG 176
           +  + A     Q         S Y LG   +++    +GD        +P  +    R  
Sbjct: 126 NVENAAIPQVEQ---------SDYLLGKLALEQAIKDNGDSFAAGYVYVPGIAPLDRRHA 176

Query: 177 GIEKAMTENGIKVETVRAG-LDPAEAQ---NIIAQFLIANPNVKALF 219
             E+  T N    E  R G LD   A    N     L ANPN+   F
Sbjct: 177 AWEEVKTANPGITEEARIGTLDNPIANANANQARAALQANPNISVFF 223