Pairwise Alignments

Query, 359 a.a., ABC transporter permease from Sinorhizobium meliloti 1021

Subject, 325 a.a., Ribose ABC transport system, permease protein RbsC (TC 3.A.1.2.1) from Pseudomonas fluorescens FW300-N2E2

 Score =  142 bits (359), Expect = 9e-39
 Identities = 93/276 (33%), Positives = 142/276 (51%), Gaps = 3/276 (1%)

Query: 76  YLSPQNLTILMKAIPVLGCLALGAGVLMIAGEFDLSIGSVYTFTA-VLMASLVNAGLSAF 134
           +LS    + L   IP L  LA+G   ++I G  DLS+GSV    A  +  +++  G S +
Sbjct: 41  FLSYDTFSTLANQIPDLMVLAVGMTFILIIGGIDLSVGSVLALAASTVSVAVLGWGWSVW 100

Query: 135 IAAPIAILTGLLIGSLNGHITLRFGLPSFIVTLGGLLFWRGAVLLYNGAVQVRFDPEPVF 194
            +A + +    L G++ G IT+ + +PSFIV+LG L   RG      G+          F
Sbjct: 101 PSALLGMAVAALAGTVTGSITVAWRIPSFIVSLGVLEMARGLAYQMTGSRTAYIGDS--F 158

Query: 195 TSLFSGTLFGVNAAFIWIVLFVTGFHLLLHRHRFGNHVFATGGNRGAAEAIGINTSRVKL 254
             L +   FG++ +FI  +L +     +L R  FG ++   G N  A    GIN    K+
Sbjct: 159 AWLSNPIAFGISPSFIIALLVIFIAQAVLTRTVFGRYLIGIGTNEEAVRLAGINPKPYKI 218

Query: 255 IAFAIAGGMAAVAGILATARVGSVQPGQGAGLELQAIAACVIGGLSLRGGRGSIIGIFLG 314
           + F++ G +A VA +   +R+ +  P  G+GLELQ IAA VIGG SL GGRGS+I  F G
Sbjct: 219 LVFSLMGLLAGVAALFQISRLEAADPNAGSGLELQVIAAVVIGGTSLMGGRGSVISTFFG 278

Query: 315 VLLIHTITDVLLLLRAPGFYLDMFIATLIVLAAIFN 350
           VL+I  +   L  + A      +    +IV+A + +
Sbjct: 279 VLIISVLAAGLAQIGATEPTKRIITGAVIVVAVVLD 314