Pairwise Alignments

Query, 359 a.a., ABC transporter permease from Sinorhizobium meliloti 1021

Subject, 333 a.a., ribose ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

 Score =  162 bits (410), Expect = 1e-44
 Identities = 94/279 (33%), Positives = 149/279 (53%), Gaps = 3/279 (1%)

Query: 76  YLSPQNLTILMKAIPVLGCLALGAGVLMIAGEFDLSIGSVYTFTAVLMASLVNAGLSAFI 135
           + +  NL  +++   V   +A+G  ++++    DLS+GSV        A+LV   +   +
Sbjct: 52  FFTVDNLLNILRQTSVNAIIAVGMTLVILTAGIDLSVGSVLALCGAFAATLVAMEVPVLV 111

Query: 136 AAPIAILTGLLIGSLNGHITLRFGLPSFIVTLGGLLFWRGAVLLYNGAVQVRF---DPEP 192
           A P A+L G  +G+++G I  +  + +FI TL  +   RG  ++Y     +     D   
Sbjct: 112 AVPTALLAGAALGAISGIIIAKGKVQAFIATLVTMTLLRGVTMVYTDGRPISTGFTDTAD 171

Query: 193 VFTSLFSGTLFGVNAAFIWIVLFVTGFHLLLHRHRFGNHVFATGGNRGAAEAIGINTSRV 252
            F    +G   G+      +V+   G   LL+  RFG +V+A GGN  A    GIN  RV
Sbjct: 172 TFAWFGTGYTLGIPVPVWLMVVVFAGAWYLLNHTRFGRYVYAVGGNESATRLSGINVDRV 231

Query: 253 KLIAFAIAGGMAAVAGILATARVGSVQPGQGAGLELQAIAACVIGGLSLRGGRGSIIGIF 312
           K+  +AI G +AA+AGI+ T+R+ S QP  G G EL AIAA V+GG SL GG+G I+G  
Sbjct: 232 KIGVYAICGLLAALAGIIVTSRLSSAQPTAGMGYELDAIAAVVLGGTSLMGGKGRIMGTL 291

Query: 313 LGVLLIHTITDVLLLLRAPGFYLDMFIATLIVLAAIFNH 351
           +G L+I  + + L LL    +Y  +  A +I+LA + ++
Sbjct: 292 IGALIIGFLNNALNLLDVSSYYQMIAKAVVILLAVLVDN 330