Pairwise Alignments

Query, 359 a.a., ABC transporter permease from Sinorhizobium meliloti 1021

Subject, 338 a.a., inner-membrane translocator (NCBI) from Rhodospirillum rubrum S1H

 Score =  155 bits (391), Expect = 2e-42
 Identities = 109/311 (35%), Positives = 162/311 (52%), Gaps = 14/311 (4%)

Query: 50  GAIFLVFMTLQIVCIAGALLYPDEFRYLSPQNLTILMKAIPVLGCLALGAGVLMIAGEFD 109
           G   LV    Q+  + GA  +P+   +L+  NL +++  I V G LA+G   ++I+   D
Sbjct: 25  GLCVLVSALCQLKVVQGA--WPEN-TFLTVNNLMLILHQISVNGVLAVGMTFVVISAGID 81

Query: 110 LSIGSVYTFTAVLMASLVNAGLSAF-------IAAPI--AILTGLLIGSLNGHITLRFGL 160
           LS+GSV  F+ ++ AS+    +          +  PI  A+  G L G L+G I  RF +
Sbjct: 82  LSVGSVLAFSGMMAASMATRSVGVTPWSDTYPVIFPIIAALGVGALCGGLSGWIIARFRI 141

Query: 161 PSFIVTLGGLLFWRGAVLLYNGAVQVRFDPEPVFTSLFSGTLFGVNAAFIWIVLFVTGFH 220
            +FI TLG LL  RG  +   G   +     P F    +G LF V    + I+  V    
Sbjct: 142 QAFIATLGMLLAARGFTMSVTGGNPIS-GLSPDFRWFGTGKLFEVIPVPVVILALVFLLA 200

Query: 221 -LLLHRHRFGNHVFATGGNRGAAEAIGINTSRVKLIAFAIAGGMAAVAGILATARVGSVQ 279
            ++L++  FG +V+A GGN  +A   GINT  + +  + +AG +A VAG++ TA+ GS Q
Sbjct: 201 WVILNKTVFGRYVYAVGGNEKSARTSGINTGAILIWVYVVAGFLAGVAGVILTAKTGSAQ 260

Query: 280 PGQGAGLELQAIAACVIGGLSLRGGRGSIIGIFLGVLLIHTITDVLLLLRAPGFYLDMFI 339
              G+  EL AIAA VIGG SL GG G + G F G L+I  + + L +L    FY  +  
Sbjct: 261 TSAGSSYELDAIAAVVIGGASLAGGVGRLTGTFFGALIIGVMNNGLDILGVQSFYQLIIK 320

Query: 340 ATLIVLAAIFN 350
             LIV+A I +
Sbjct: 321 GGLIVVAVILD 331