Pairwise Alignments

Query, 246 a.a., ABC transporter ATP-binding protein from Sinorhizobium meliloti 1021

Subject, 500 a.a., ribose import ATP-binding protein RbsA from Vibrio cholerae E7946 ATCC 55056

 Score =  152 bits (385), Expect = 1e-41
 Identities = 85/241 (35%), Positives = 138/241 (57%), Gaps = 3/241 (1%)

Query: 4   TPNLLELHNISKSFGALTALRNLSFHIGEGEVVGLLGDNGAGKSTTVNLISGIHKPTDGY 63
           T  +L L  I K+F  + AL   S ++  G V+ L+G+NGAGKST + +++GI+    G 
Sbjct: 2   TQAILALSQIEKAFPGVKALDKASLNVYPGRVMALMGENGAGKSTLMKVLTGIYSKDAGS 61

Query: 64  LSVDGKKTTFSCRSDSADAGIETIYQHTALVDSLSITRNIFMGRELTDRFGFLRQREMRD 123
           +   G+  +F    DS  AGI  I+Q   L+  L+I  NIF+GRE+T  FG +   EM  
Sbjct: 62  IEYQGQPVSFKGPRDSQLAGISIIHQELNLIPQLTIAENIFLGREMTSPFGRILWDEMHR 121

Query: 124 IAMEVLQNAVHISGIDSPDTLVGNLSGGQKQAVAIARAVYFKKRVLLLDEPTSALSVRET 183
            A ++L     ++   S  TL+G LS G++Q V IA+A+ F+ +V+++DEPT AL+  ET
Sbjct: 122 KADQLL---ARLNVKHSAKTLLGELSLGEQQMVEIAKALSFESKVIIMDEPTDALTDTET 178

Query: 184 EALLNQVLKLKAENVSSVLVTHNLYHAYQVCDRFVIMSHGTKVFDVQKADTTISQLTEYV 243
           E+L N + +L+ +    V ++H L   +++CD   ++  G  + + +  DT    L E +
Sbjct: 179 ESLFNVINELREQGCGIVYISHRLKEIFEICDDITVLRDGKFIGECRVCDTNEDGLIEMM 238

Query: 244 V 244
           V
Sbjct: 239 V 239



 Score = 82.0 bits (201), Expect = 2e-20
 Identities = 59/208 (28%), Positives = 105/208 (50%), Gaps = 8/208 (3%)

Query: 21  TALRNLSFHIGEGEVVGLLGDNGAGKSTTVNLISGIHKPTDGYLSVDGKKTTFSCRSDSA 80
           + + ++SF + +GE++G+ G  GAG++  + +I G      G ++++G+        D  
Sbjct: 267 SGVHDVSFTLKKGEILGVSGLMGAGRTELMKVIYGALPSERGVINLNGRTVNPVSPQDGL 326

Query: 81  DAGIETIYQHT---ALVDSLSITRNIFMGRELTDRFGFLRQREMRDIAMEVLQNAVHISG 137
             GI  I +      LV  LS+  N  M     D+     Q    D  + V  + + +  
Sbjct: 327 ANGIAYISEDRKGDGLVLGLSVKEN--MSLCALDQLSKGVQIRHADEVIAV-DDFIRLFN 383

Query: 138 IDSP--DTLVGNLSGGQKQAVAIARAVYFKKRVLLLDEPTSALSVRETEALLNQVLKLKA 195
           I +P  + ++GNLSGG +Q VAIA+ +  K +VL+LDEPT  + V   + +   + + KA
Sbjct: 384 IKTPSREQIIGNLSGGNQQKVAIAKGLMTKPKVLILDEPTRGVDVGAKKEIYQLINQFKA 443

Query: 196 ENVSSVLVTHNLYHAYQVCDRFVIMSHG 223
           E +S +LV+  +     + DR ++M  G
Sbjct: 444 EGMSIILVSSEMPEVLGMSDRILVMHEG 471