Pairwise Alignments

Query, 487 a.a., ABC transporter ATP-binding protein from Sinorhizobium meliloti 1021

Subject, 500 a.a., ribose import ATP-binding protein RbsA from Vibrio cholerae E7946 ATCC 55056

 Score =  230 bits (587), Expect = 7e-65
 Identities = 156/495 (31%), Positives = 260/495 (52%), Gaps = 25/495 (5%)

Query: 9   VAKAIIAVDGAKVSFGAVKALDGVTLRVMPGECVGLVGHNGAGKSTIVSVINGGLTPHHG 68
           + +AI+A+   + +F  VKALD  +L V PG  + L+G NGAGKST++ V+ G  +   G
Sbjct: 1   MTQAILALSQIEKAFPGVKALDKASLNVYPGRVMALMGENGAGKSTLMKVLTGIYSKDAG 60

Query: 69  IVTSDGERQERYGINAARDRGVRCVFQELSLCPNLSIVENTRLVHRTLGGFGWRLRAAKI 128
            +   G+     G   ++  G+  + QEL+L P L+I EN  L       FG R+   ++
Sbjct: 61  SIEYQGQPVSFKGPRDSQLAGISIIHQELNLIPQLTIAENIFLGREMTSPFG-RILWDEM 119

Query: 129 IEKSLDAVFPGHGIDSGRTV-GDLSIAERQMVEIALAFSDAGTPARLVILDEPTSSLDAS 187
             K+   +   +   S +T+ G+LS+ E+QMVEIA A S     ++++I+DEPT +L  +
Sbjct: 120 HRKADQLLARLNVKHSAKTLLGELSLGEQQMVEIAKALS---FESKVIIMDEPTDALTDT 176

Query: 188 LARQMLDHVRRFIAAGGSVIFISHILHEILETADRIVVMKDGRVVAERPAHRFDHHGLVE 247
               + + +      G  +++ISH L EI E  D I V++DG+ + E      +  GL+E
Sbjct: 177 ETESLFNVINELREQGCGIVYISHRLKEIFEICDDITVLRDGKFIGECRVCDTNEDGLIE 236

Query: 248 AMGSVAKAETRQRPVCDQPAAPV-ILSHEAAGI---PFTARTGEIIGLAGLAGHGQTELL 303
            M      E   R    Q    + ++    +G+    FT + GEI+G++GL G G+TEL+
Sbjct: 237 MMVGRKLEEQYPRIAAQQGDISLEVIGLTGSGVHDVSFTLKKGEILGVSGLMGAGRTELM 296

Query: 304 LALHAA------------RSGNWLPQGNPL---VTFVAGDRRLNGVFELWSILRNFSIAS 348
             ++ A            R+ N +   + L   + +++ DR+ +G+    S+  N S+ +
Sbjct: 297 KVIYGALPSERGVINLNGRTVNPVSPQDGLANGIAYISEDRKGDGLVLGLSVKENMSLCA 356

Query: 349 LGDMSRRGLVLEAGEKTRGTAWKERIEIRTPDLNNRILSLSGGNQQKVLFARALATRAPI 408
           L  +S+   +  A E      +     I+TP     I +LSGGNQQKV  A+ L T+  +
Sbjct: 357 LDQLSKGVQIRHADEVIAVDDFIRLFNIKTPSREQIIGNLSGGNQQKVAIAKGLMTKPKV 416

Query: 409 VLMDDPMRGVDVGTKQEVYAIIREEAAAGRTFIWYSTEMDEVC-LCDRVYVFREGRITAE 467
           +++D+P RGVDVG K+E+Y +I +  A G + I  S+EM EV  + DR+ V  EGRI+ E
Sbjct: 417 LILDEPTRGVDVGAKKEIYQLINQFKAEGMSIILVSSEMPEVLGMSDRILVMHEGRISGE 476

Query: 468 LGGDAVDEANIISAS 482
                 D+  +++ +
Sbjct: 477 FMASEADQEKLMACA 491