Pairwise Alignments

Query, 315 a.a., ABC transporter permease from Sinorhizobium meliloti 1021

Subject, 333 a.a., ribose ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

 Score = 96.7 bits (239), Expect = 7e-25
 Identities = 72/292 (24%), Positives = 137/292 (46%), Gaps = 10/292 (3%)

Query: 17  LSLSLLLAAVFWLQPRAMSYIGLNLLFNLAVPIALATIAQMLVMAVNDLDLSMGAFVSFV 76
           ++L  L+  V +L P   +   L  +       A+  +   LV+    +DLS+G+ ++  
Sbjct: 36  IALLFLVVVVSFLNPNFFTVDNLLNILRQTSVNAIIAVGMTLVILTAGIDLSVGSVLALC 95

Query: 77  ACVTATFLR-DAP---AIGILILAGAVAAYAAIGVVIHLRNLPSIVVTLGMSFVWGGLAV 132
               AT +  + P   A+   +LAGA A  A  G++I    + + + TL    +  G+ +
Sbjct: 96  GAFAATLVAMEVPVLVAVPTALLAGA-ALGAISGIIIAKGKVQAFIATLVTMTLLRGVTM 154

Query: 133 LLL---PAPGG--QAPDWVRWLMTVKPPLAPMAIVASIIIAVIAHFIVKRSSLGVLIRGV 187
           +     P   G     D   W  T      P+ +   +++   A +++  +  G  +  V
Sbjct: 155 VYTDGRPISTGFTDTADTFAWFGTGYTLGIPVPVWLMVVVFAGAWYLLNHTRFGRYVYAV 214

Query: 188 GGNQRSVERAGWSIVAARATAYALAGLFAVLAGIALVGLTTSADANIALRYTLLSIAGVI 247
           GGN+ +   +G ++   +   YA+ GL A LAGI +    +SA     + Y L +IA V+
Sbjct: 215 GGNESATRLSGINVDRVKIGVYAICGLLAALAGIIVTSRLSSAQPTAGMGYELDAIAAVV 274

Query: 248 LGGGEFTGGRVSPIGAVIGALTLTLASSFLSFLRISPDWQIGAQGAILIIVL 299
           LGG    GG+   +G +IGAL +   ++ L+ L +S  +Q+ A+  ++++ +
Sbjct: 275 LGGTSLMGGKGRIMGTLIGALIIGFLNNALNLLDVSSYYQMIAKAVVILLAV 326