Pairwise Alignments

Query, 315 a.a., ABC transporter permease from Sinorhizobium meliloti 1021

Subject, 338 a.a., inner-membrane translocator (NCBI) from Rhodospirillum rubrum S1H

 Score = 88.2 bits (217), Expect = 3e-22
 Identities = 75/313 (23%), Positives = 140/313 (44%), Gaps = 24/313 (7%)

Query: 12  LVIPALSLSLLLAAVF--------WLQPRAMSYIGLNLLFNLAVPIALATIAQMLVMAVN 63
           +V   L L +L++A+         W +   ++   L L+ +      +  +    V+   
Sbjct: 19  IVFAFLGLCVLVSALCQLKVVQGAWPENTFLTVNNLMLILHQISVNGVLAVGMTFVVISA 78

Query: 64  DLDLSMGAFVSFVACVTATFLRDA----------PAIGILILAGAVAAYAA--IGVVIHL 111
            +DLS+G+ ++F   + A+    +          P I  +I A  V A      G +I  
Sbjct: 79  GIDLSVGSVLAFSGMMAASMATRSVGVTPWSDTYPVIFPIIAALGVGALCGGLSGWIIAR 138

Query: 112 RNLPSIVVTLGMSFVWGGLAVLLLPAP--GGQAPDWVRWLMTVKP-PLAPMAIVASIIIA 168
             + + + TLGM     G  + +       G +PD+ RW  T K   + P+ +V   ++ 
Sbjct: 139 FRIQAFIATLGMLLAARGFTMSVTGGNPISGLSPDF-RWFGTGKLFEVIPVPVVILALVF 197

Query: 169 VIAHFIVKRSSLGVLIRGVGGNQRSVERAGWSIVAARATAYALAGLFAVLAGIALVGLTT 228
           ++A  I+ ++  G  +  VGGN++S   +G +  A     Y +AG  A +AG+ L   T 
Sbjct: 198 LLAWVILNKTVFGRYVYAVGGNEKSARTSGINTGAILIWVYVVAGFLAGVAGVILTAKTG 257

Query: 229 SADANIALRYTLLSIAGVILGGGEFTGGRVSPIGAVIGALTLTLASSFLSFLRISPDWQI 288
           SA  +    Y L +IA V++GG    GG     G   GAL + + ++ L  L +   +Q+
Sbjct: 258 SAQTSAGSSYELDAIAAVVIGGASLAGGVGRLTGTFFGALIIGVMNNGLDILGVQSFYQL 317

Query: 289 GAQGAILIIVLAL 301
             +G ++++ + L
Sbjct: 318 IIKGGLIVVAVIL 330