Pairwise Alignments

Query, 315 a.a., ABC transporter permease from Sinorhizobium meliloti 1021

Subject, 341 a.a., ribose ABC transporter permease from Burkholderia phytofirmans PsJN

 Score =  107 bits (267), Expect = 4e-28
 Identities = 80/281 (28%), Positives = 135/281 (48%), Gaps = 19/281 (6%)

Query: 36  LGLSQAALTFAAFSVIVGIGQMFVITLGPGNIDLSVPATMTLAGTVALKLMNVENGMVLP 95
           LG+ QA     A + ++ I   FVI  G   IDLSV   MT    +    +   +  +  
Sbjct: 59  LGILQAT----AVNGVLAIACTFVIITG--GIDLSVGTLMTFTAVICGVFLTYWHLPMWT 112

Query: 96  GLLLAVFIGLGVGLCNYTLIKALRIPPIIATLSMSFVVQSGAIW-----------TNRGL 144
           G+L A+  G   G  + TL   ++IPP IATL M  +++  ++            T    
Sbjct: 113 GVLAAIGTGAICGTVSGTLTAKMKIPPFIATLGMMMLLKGLSLVVSADKPIYFTDTENFY 172

Query: 145 RIKPPSVLAEFTTTNTLGVPNVAIVAVLISVLAWILLEKTIYGRWISAIGQSMPAARMAG 204
            I   S++ +   +  L VPN  ++   ++V++ I L +T  GR+  A+G +  A R++G
Sbjct: 173 MISQDSLIGDLLPS--LPVPNAVLILFFLAVVSSITLNRTALGRYTFALGSNEEAVRLSG 230

Query: 205 IPVDGTRFVTYLFCAVLASISGYLLACFSGGAALNMGAEYLLMSIAVVVIGGTAVAGGDS 264
           + VD  +   Y     +  I+G L+A     A   +G  Y L +IA VVIGGT+++GG  
Sbjct: 231 VNVDRWKIAIYGLSGAICGIAGLLIASRLNSAQPALGQGYELEAIAAVVIGGTSLSGGAG 290

Query: 265 NVPGIWGASLFMFLVVSMLNTYGLGAGIRLIMTGLIIISVI 305
            + G    +  M ++ + L    +    ++++TGLIII  +
Sbjct: 291 TILGTIIGAFIMSVLTNGLRIMSVAQEWQIVVTGLIIILAV 331