Pairwise Alignments

Query, 360 a.a., hypothetical protein from Sinorhizobium meliloti 1021

Subject, 569 a.a., mechanosensitive ion channel protein MscS from Vibrio cholerae E7946 ATCC 55056

 Score = 63.9 bits (154), Expect = 1e-14
 Identities = 69/309 (22%), Positives = 127/309 (41%), Gaps = 31/309 (10%)

Query: 5   DKEQENLSRLEQAAQQTADPKTMQQKATKGPEEKLRFSLR--KKDVWWTVGLAAAALLLF 62
           + E+ NL       QQ  D  T   ++  G  ++        K+ ++   G     LL  
Sbjct: 217 ESEKANLQLALLFTQQRLDIVTKSLRSVVGIADQFEIETADYKRQIFQVTGSITQDLL-- 274

Query: 63  GIQVLINWRLDWLDVPLRLRVMNYVKGGLLIFIMLTV-------ANVIEVFLIG------ 109
             QV+ +    W +  +     N V+    +FI L +       A V    +        
Sbjct: 275 NTQVVFSIVRHWSNSLVNWLASNAVQHLFQLFIFLLILLAAKGGAKVTRTVVRSAVNSKN 334

Query: 110 -RIPNRVSRFNLKRIFRLVVVVAIVFVAISVLFVNWYAAFVSLGLISLILGFALQMPISS 168
            RI + +  F +    ++V V+ I+ V +S + +N        G+  +I+GFALQ  +S+
Sbjct: 335 IRISHLMQDFFVSMSGKVVWVIGIL-VGLSQIGLNLAPVLTGFGIAGVIIGFALQDTLSN 393

Query: 169 FIAWIYILARAPYRVGDRIRIGDAHGDVIDVSYLDTTLWEFGGEYLWTDHPSGRIIKFPN 228
           F A + +L   P+ VGD +  G   G V  +S ++TT+  F            +II  PN
Sbjct: 394 FAAGMMLLIYRPFDVGDFVHAGGVDGKVSHMSLVNTTIRTF----------DNQIIIVPN 443

Query: 229 STVFDTPVFNYSWPLFPYVWNEIKFQLAYESDLEFVARTMREVVEEQVGDIMSQKVKIYK 288
           S ++   + N +      V  ++ F + Y  DL      + ++V+     + + +  I  
Sbjct: 444 SKIWGDVIKNVTHERIRRV--DMVFGIGYSDDLLKAEAVLTDIVKSHPAVLKTPEPNIKV 501

Query: 289 HILSNTPVD 297
           H L+ + +D
Sbjct: 502 HTLNTSSID 510