Pairwise Alignments

Query, 176 a.a., hypothetical protein from Sinorhizobium meliloti 1021

Subject, 567 a.a., tetratricopeptide repeat protein from Methanococcus maripaludis S2

 Score = 42.0 bits (97), Expect = 2e-08
 Identities = 25/79 (31%), Positives = 40/79 (50%)

Query: 47  AEFDPTSALASSGDVSKSDLDQGKLQFMNGNYGLAEKHFRKAVELRQDNAEALMGLAACY 106
           AE +   A+A  G  SK+  +       +  Y  AE+H++KA+E+  D   A+  LAA Y
Sbjct: 461 AEIEFKKAVALDGSNSKAYNNLATFLAKSEKYDEAEEHYKKAIEIAPDYWAAIYNLAAMY 520

Query: 107 DRLGRFDLADRAYNQLLKV 125
             L R+D A      ++K+
Sbjct: 521 AALKRYDEAVAQVKSMVKI 539



 Score = 33.9 bits (76), Expect = 5e-06
 Identities = 22/75 (29%), Positives = 39/75 (52%), Gaps = 2/75 (2%)

Query: 78  YGLAEKHFRKAVELRQDNAEALMGLAACYDRLGRFDLADRAYNQLLKVAGRQPRIVNNMG 137
           YG AE  F+KAV L   N++A   LA    +  ++D A+  Y + +++A      + N+ 
Sbjct: 458 YGEAEIEFKKAVALDGSNSKAYNNLATFLAKSEKYDEAEEHYKKAIEIAPDYWAAIYNLA 517

Query: 138 --YSQYLRGEKAKAR 150
             Y+   R ++A A+
Sbjct: 518 AMYAALKRYDEAVAQ 532



 Score = 26.9 bits (58), Expect = 6e-04
 Identities = 12/64 (18%), Positives = 31/64 (48%)

Query: 73  FMNGNYGLAEKHFRKAVELRQDNAEALMGLAACYDRLGRFDLADRAYNQLLKVAGRQPRI 132
           + +G++  A+  ++KA+ L   N+E         + L ++  A+  + + + + G   + 
Sbjct: 419 YESGDFEAAKTEYKKAIALNPGNSEVHNHYGCLLEYLEKYGEAEIEFKKAVALDGSNSKA 478

Query: 133 VNNM 136
            NN+
Sbjct: 479 YNNL 482



 Score = 25.0 bits (53), Expect = 0.002
 Identities = 15/62 (24%), Positives = 29/62 (46%), Gaps = 1/62 (1%)

Query: 62  SKSDLDQGKLQFMNGNYGLAEKHFRKAVELRQDNAEALMGLAACYDRLGRFDLADRAYNQ 121
           S+   + G + F  G Y  A + ++KAV++  D  +AL    +    +  FD+ +     
Sbjct: 137 SQISFNMGNIYFNFGKYAEAIRCYKKAVKIIPDFVDALHNFNS-LSNMNLFDMGEEPKKP 195

Query: 122 LL 123
           +L
Sbjct: 196 VL 197