Pairwise Alignments

Query, 176 a.a., hypothetical protein from Sinorhizobium meliloti 1021

Subject, 571 a.a., tetratricopeptide repeat protein from Methanococcus maripaludis JJ

 Score = 42.7 bits (99), Expect = 1e-08
 Identities = 25/79 (31%), Positives = 40/79 (50%)

Query: 47  AEFDPTSALASSGDVSKSDLDQGKLQFMNGNYGLAEKHFRKAVELRQDNAEALMGLAACY 106
           AE +   A+A  G  SK+  +       +  Y  AE+H++KA+E+  D   A+  LAA Y
Sbjct: 465 AEIEFKKAIALDGSNSKAHNNLATFLAKSEKYDEAEEHYKKAIEIDPDYWAAIYNLAAMY 524

Query: 107 DRLGRFDLADRAYNQLLKV 125
             L R+D A      ++K+
Sbjct: 525 AALKRYDEAVAQVKSMVKI 543



 Score = 30.8 bits (68), Expect = 4e-05
 Identities = 15/48 (31%), Positives = 27/48 (56%)

Query: 78  YGLAEKHFRKAVELRQDNAEALMGLAACYDRLGRFDLADRAYNQLLKV 125
           YG AE  F+KA+ L   N++A   LA    +  ++D A+  Y + +++
Sbjct: 462 YGEAEIEFKKAIALDGSNSKAHNNLATFLAKSEKYDEAEEHYKKAIEI 509



 Score = 25.4 bits (54), Expect = 0.002
 Identities = 15/62 (24%), Positives = 29/62 (46%), Gaps = 1/62 (1%)

Query: 62  SKSDLDQGKLQFMNGNYGLAEKHFRKAVELRQDNAEALMGLAACYDRLGRFDLADRAYNQ 121
           S+   + G + F  G Y  A + ++KAV++  D  +AL    +    +  FD+ +     
Sbjct: 137 SQISFNMGNIYFNFGKYAEAIRCYKKAVKIIPDFVDALHNFNS-LSNMNLFDMGEETKKP 195

Query: 122 LL 123
           +L
Sbjct: 196 VL 197