Pairwise Alignments

Query, 466 a.a., PilQ2 pilus assembly protein from Sinorhizobium meliloti 1021

Subject, 578 a.a., type IV pilus secretin PilQ from Vibrio cholerae E7946 ATCC 55056

 Score = 90.1 bits (222), Expect = 2e-22
 Identities = 71/274 (25%), Positives = 120/274 (43%), Gaps = 27/274 (9%)

Query: 157 QIASRFAGDEEVINSIKITSSQQVQLNVRFVEINRDVGKELGTQISA------------- 203
           ++    A   E+I S+ I   +QVQ+  R V +     +ELG +                
Sbjct: 306 ELPDNIAVIREIIESLDIPV-KQVQIEARIVTVKEGNLEELGVRWGVMSTNGSHSVGGSI 364

Query: 204 -AYAWSNGSV--------EFNSSPRATSNTPAGSLIGSL--IGEGYSVDVAIDALEDRGM 252
            +  W  G +        EF +   A+++  A S+   +  +G G  +D+ + AL++   
Sbjct: 365 ESNLWQKGLLADDEFPVDEFLNVNLASTSANASSIAFQVAKLGSGTLLDLELSALQNESK 424

Query: 253 ARRLAEPNLIARSGETSSFLAGGEFPIPISEQDGTITVSYKKFGVGLDFTPTVLSDGLIA 312
           A  ++ P LI  + + +    G E P   S   G  TV++KK  + L  TP +  D  + 
Sbjct: 425 AEIISSPRLITTNKQPAYIEQGTEIPYLESSSSGASTVAFKKAVLSLKVTPQITPDNRLV 484

Query: 313 LDIEPEVSAIDNTASYRVGNIAIPGFSVRRARTSVDLKSGQSFMIAGLLQSENNLITQRV 372
           LD+         T     G         +R  T V + +G++ ++ G+ Q   N    +V
Sbjct: 485 LDLSVTQDRRGETVKTGTGEAV--SIDTQRIGTQVLVNNGETVVLGGIFQHSINNSVDKV 542

Query: 373 PGLGQLPILGALFSSKAYQRRETDLVIIVTPHLV 406
           P LG LP+LGALF     Q  +++L+I VTP +V
Sbjct: 543 PLLGDLPVLGALFRRTYEQMGKSELLIFVTPKVV 576